Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops4O88544 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops4O88544 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops4O88544 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Cops4O88544 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cops4O88544 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cops4O88544 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cops4O88544 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cops4O88544 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.76□□□□□ -0.21
Cops4O88544 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cops4O88544 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cops4O88544 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Cops4O88544 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.76□□□□□ -0.21
Cops4O88544 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cops4O88544 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cops4O88544 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Cops4O88544 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 Gm25406-201ENSMUST00000157599 105 ntBASIC13.76□□□□□ -0.21
Cops4O88544 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.76□□□□□ -0.21
Cops4O88544 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.76□□□□□ -0.21
Cops4O88544 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Cops4O88544 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cops4O88544 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cops4O88544 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Cops4O88544 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops4O88544 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.76□□□□□ -0.21
Cops4O88544 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops4O88544 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops4O88544 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops4O88544 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops4O88544 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops4O88544 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cops4O88544 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops4O88544 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops4O88544 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops4O88544 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops4O88544 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops4O88544 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
Cops4O88544 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.75□□□□□ -0.21
Cops4O88544 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cops4O88544 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cops4O88544 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.75□□□□□ -0.21
Cops4O88544 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops4O88544 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops4O88544 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops4O88544 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops4O88544 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops4O88544 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops4O88544 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops4O88544 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops4O88544 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops4O88544 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops4O88544 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops4O88544 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops4O88544 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops4O88544 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops4O88544 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops4O88544 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops4O88544 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.75□□□□□ -0.21
Cops4O88544 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cops4O88544 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Cops4O88544 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cops4O88544 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.74□□□□□ -0.21
Cops4O88544 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cops4O88544 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops4O88544 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops4O88544 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops4O88544 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Cops4O88544 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cops4O88544 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops4O88544 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
Cops4O88544 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms