Protein–RNA interactions for Protein: O88509

Dnmt3b, DNA (cytosine-5)-methyltransferase 3B, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3bO88509 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.39□□□□□ -0.11
Dnmt3bO88509 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Dnmt3bO88509 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dnmt3bO88509 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dnmt3bO88509 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.39□□□□□ -0.11
Dnmt3bO88509 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.39□□□□□ -0.11
Dnmt3bO88509 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Dnmt3bO88509 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.39□□□□□ -0.11
Dnmt3bO88509 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.39□□□□□ -0.11
Dnmt3bO88509 Gm9172-201ENSMUST00000212092 954 ntBASIC14.39□□□□□ -0.11
Dnmt3bO88509 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.39□□□□□ -0.11
Dnmt3bO88509 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.39□□□□□ -0.11
Dnmt3bO88509 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Dnmt3bO88509 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dnmt3bO88509 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.39□□□□□ -0.11
Dnmt3bO88509 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dnmt3bO88509 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Dnmt3bO88509 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dnmt3bO88509 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3bO88509 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3bO88509 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Dnmt3bO88509 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3bO88509 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3bO88509 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3bO88509 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.38□□□□□ -0.11
Dnmt3bO88509 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3bO88509 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Dnmt3bO88509 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3bO88509 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3bO88509 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3bO88509 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3bO88509 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.38□□□□□ -0.11
Dnmt3bO88509 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3bO88509 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3bO88509 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3bO88509 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3bO88509 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3bO88509 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Dnmt3bO88509 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Dnmt3bO88509 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3bO88509 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3bO88509 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3bO88509 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3bO88509 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3bO88509 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Dnmt3bO88509 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3bO88509 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Dnmt3bO88509 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3bO88509 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Dnmt3bO88509 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3bO88509 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Dnmt3bO88509 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3bO88509 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Dnmt3bO88509 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3bO88509 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3bO88509 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3bO88509 Gm4459-201ENSMUST00000118750 468 ntBASIC14.37□□□□□ -0.11
Dnmt3bO88509 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.37□□□□□ -0.11
Dnmt3bO88509 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3bO88509 Gm26308-201ENSMUST00000157768 69 ntBASIC14.37□□□□□ -0.11
Dnmt3bO88509 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
Dnmt3bO88509 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3bO88509 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.37□□□□□ -0.11
Dnmt3bO88509 Gm8655-201ENSMUST00000221159 852 ntBASIC14.37□□□□□ -0.11
Dnmt3bO88509 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3bO88509 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3bO88509 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3bO88509 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.37□□□□□ -0.11
Dnmt3bO88509 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3bO88509 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3bO88509 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3bO88509 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Dnmt3bO88509 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3bO88509 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Dnmt3bO88509 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Dnmt3bO88509 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Dnmt3bO88509 Matn2-206ENSMUST00000228570 2798 ntBASIC14.36□□□□□ -0.11
Dnmt3bO88509 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.36□□□□□ -0.11
Dnmt3bO88509 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Dnmt3bO88509 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Dnmt3bO88509 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Dnmt3bO88509 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Dnmt3bO88509 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Dnmt3bO88509 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Dnmt3bO88509 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.36□□□□□ -0.11
Dnmt3bO88509 Gm13036-201ENSMUST00000117799 748 ntBASIC14.36□□□□□ -0.11
Dnmt3bO88509 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.36□□□□□ -0.11
Dnmt3bO88509 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Dnmt3bO88509 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Dnmt3bO88509 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.36□□□□□ -0.11
Dnmt3bO88509 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.36□□□□□ -0.11
Dnmt3bO88509 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.36□□□□□ -0.11
Dnmt3bO88509 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Dnmt3bO88509 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Dnmt3bO88509 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Dnmt3bO88509 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Dnmt3bO88509 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Dnmt3bO88509 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Dnmt3bO88509 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.36□□□□□ -0.11
Dnmt3bO88509 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms