Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Capns1O88456 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Capns1O88456 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Capns1O88456 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.78□□□□□ -0.2
Capns1O88456 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Capns1O88456 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Capns1O88456 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Capns1O88456 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Capns1O88456 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Capns1O88456 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Capns1O88456 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Capns1O88456 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Capns1O88456 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Capns1O88456 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.77□□□□□ -0.21
Capns1O88456 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Capns1O88456 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Capns1O88456 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Capns1O88456 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Capns1O88456 Gm7862-201ENSMUST00000121461 292 ntBASIC13.77□□□□□ -0.21
Capns1O88456 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Capns1O88456 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Capns1O88456 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.77□□□□□ -0.21
Capns1O88456 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.77□□□□□ -0.21
Capns1O88456 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.77□□□□□ -0.21
Capns1O88456 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Capns1O88456 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Capns1O88456 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Capns1O88456 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Capns1O88456 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Capns1O88456 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Capns1O88456 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Capns1O88456 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Capns1O88456 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Capns1O88456 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Capns1O88456 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Capns1O88456 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Capns1O88456 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.77□□□□□ -0.21
Capns1O88456 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Capns1O88456 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Capns1O88456 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Capns1O88456 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Capns1O88456 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Capns1O88456 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Capns1O88456 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Capns1O88456 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Capns1O88456 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Capns1O88456 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Capns1O88456 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Capns1O88456 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Capns1O88456 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Capns1O88456 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Capns1O88456 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Capns1O88456 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.76□□□□□ -0.21
Capns1O88456 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Capns1O88456 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Capns1O88456 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Capns1O88456 Gm12644-201ENSMUST00000119935 606 ntBASIC13.76□□□□□ -0.21
Capns1O88456 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Capns1O88456 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.76□□□□□ -0.21
Capns1O88456 Gm8000-201ENSMUST00000188378 592 ntBASIC13.76□□□□□ -0.21
Capns1O88456 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.76□□□□□ -0.21
Capns1O88456 Gm6296-201ENSMUST00000222599 943 ntBASIC13.76□□□□□ -0.21
Capns1O88456 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Capns1O88456 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Capns1O88456 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Capns1O88456 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Capns1O88456 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Capns1O88456 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Capns1O88456 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Capns1O88456 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Capns1O88456 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Capns1O88456 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Capns1O88456 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Capns1O88456 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Capns1O88456 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Capns1O88456 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Capns1O88456 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.75□□□□□ -0.21
Capns1O88456 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Capns1O88456 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Capns1O88456 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Capns1O88456 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Capns1O88456 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Capns1O88456 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Capns1O88456 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Capns1O88456 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Capns1O88456 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Capns1O88456 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Capns1O88456 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Capns1O88456 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Capns1O88456 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Capns1O88456 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Capns1O88456 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Capns1O88456 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Capns1O88456 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Capns1O88456 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Capns1O88456 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Capns1O88456 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.75□□□□□ -0.21
Capns1O88456 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Capns1O88456 Gm23547-201ENSMUST00000158210 271 ntBASIC13.75□□□□□ -0.21
Capns1O88456 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms