Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Gm6736-201ENSMUST00000166583 948 ntBASIC16.47■□□□□ 0.23
IkbkbO88351 Gm24513-201ENSMUST00000174964 138 ntBASIC16.47■□□□□ 0.23
IkbkbO88351 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IkbkbO88351 Gm27397-201ENSMUST00000184997 107 ntBASIC16.47■□□□□ 0.23
IkbkbO88351 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.47■□□□□ 0.23
IkbkbO88351 Gm18246-201ENSMUST00000221023 728 ntBASIC16.47■□□□□ 0.23
IkbkbO88351 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
IkbkbO88351 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
IkbkbO88351 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IkbkbO88351 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IkbkbO88351 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IkbkbO88351 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IkbkbO88351 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IkbkbO88351 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
IkbkbO88351 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IkbkbO88351 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IkbkbO88351 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IkbkbO88351 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
IkbkbO88351 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
IkbkbO88351 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IkbkbO88351 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
IkbkbO88351 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.46■□□□□ 0.23
IkbkbO88351 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IkbkbO88351 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IkbkbO88351 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IkbkbO88351 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IkbkbO88351 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IkbkbO88351 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.46■□□□□ 0.23
IkbkbO88351 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IkbkbO88351 Gm14822-201ENSMUST00000122247 291 ntBASIC16.46■□□□□ 0.23
IkbkbO88351 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.46■□□□□ 0.23
IkbkbO88351 Gm17968-201ENSMUST00000194902 784 ntBASIC16.46■□□□□ 0.23
IkbkbO88351 Gm2756-201ENSMUST00000195851 400 ntBASIC16.46■□□□□ 0.23
IkbkbO88351 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IkbkbO88351 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
IkbkbO88351 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IkbkbO88351 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
IkbkbO88351 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IkbkbO88351 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IkbkbO88351 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
IkbkbO88351 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IkbkbO88351 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IkbkbO88351 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IkbkbO88351 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.46■□□□□ 0.23
IkbkbO88351 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.22
IkbkbO88351 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
IkbkbO88351 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
IkbkbO88351 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IkbkbO88351 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IkbkbO88351 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IkbkbO88351 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
IkbkbO88351 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.45■□□□□ 0.22
IkbkbO88351 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IkbkbO88351 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
IkbkbO88351 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
IkbkbO88351 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.45■□□□□ 0.22
IkbkbO88351 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IkbkbO88351 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.45■□□□□ 0.22
IkbkbO88351 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IkbkbO88351 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.45■□□□□ 0.22
IkbkbO88351 Gm43575-201ENSMUST00000196420 516 ntBASIC16.45■□□□□ 0.22
IkbkbO88351 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
IkbkbO88351 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
IkbkbO88351 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
IkbkbO88351 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IkbkbO88351 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IkbkbO88351 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.45■□□□□ 0.22
IkbkbO88351 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IkbkbO88351 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IkbkbO88351 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IkbkbO88351 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IkbkbO88351 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
IkbkbO88351 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IkbkbO88351 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
IkbkbO88351 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IkbkbO88351 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
IkbkbO88351 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
IkbkbO88351 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IkbkbO88351 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IkbkbO88351 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IkbkbO88351 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IkbkbO88351 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IkbkbO88351 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.44■□□□□ 0.22
IkbkbO88351 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IkbkbO88351 Gm10499-201ENSMUST00000174094 934 ntBASIC16.44■□□□□ 0.22
IkbkbO88351 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.44■□□□□ 0.22
IkbkbO88351 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
IkbkbO88351 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.44■□□□□ 0.22
IkbkbO88351 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.44■□□□□ 0.22
IkbkbO88351 Gm44492-201ENSMUST00000197012 141 ntBASIC16.44■□□□□ 0.22
IkbkbO88351 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.44■□□□□ 0.22
IkbkbO88351 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.44■□□□□ 0.22
IkbkbO88351 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IkbkbO88351 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IkbkbO88351 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
IkbkbO88351 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.44■□□□□ 0.22
IkbkbO88351 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IkbkbO88351 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IkbkbO88351 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IkbkbO88351 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms