Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pja1O55176 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pja1O55176 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Pja1O55176 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pja1O55176 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Pja1O55176 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pja1O55176 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pja1O55176 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pja1O55176 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pja1O55176 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pja1O55176 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pja1O55176 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pja1O55176 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Pja1O55176 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pja1O55176 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Pja1O55176 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pja1O55176 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pja1O55176 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pja1O55176 Gm37153-201ENSMUST00000193637 231 ntBASIC15.72■□□□□ 0.11
Pja1O55176 Gm6089-201ENSMUST00000197666 938 ntBASIC15.72■□□□□ 0.11
Pja1O55176 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.72■□□□□ 0.11
Pja1O55176 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pja1O55176 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pja1O55176 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pja1O55176 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Pja1O55176 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pja1O55176 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pja1O55176 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pja1O55176 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.72■□□□□ 0.11
Pja1O55176 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Pja1O55176 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pja1O55176 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pja1O55176 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.71■□□□□ 0.11
Pja1O55176 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pja1O55176 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pja1O55176 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pja1O55176 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pja1O55176 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pja1O55176 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Pja1O55176 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pja1O55176 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pja1O55176 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pja1O55176 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.71■□□□□ 0.11
Pja1O55176 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.71■□□□□ 0.11
Pja1O55176 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.71■□□□□ 0.11
Pja1O55176 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.71■□□□□ 0.11
Pja1O55176 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pja1O55176 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Pja1O55176 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Pja1O55176 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.71■□□□□ 0.11
Pja1O55176 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pja1O55176 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pja1O55176 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pja1O55176 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pja1O55176 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.71■□□□□ 0.11
Pja1O55176 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pja1O55176 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pja1O55176 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pja1O55176 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.71■□□□□ 0.1
Pja1O55176 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pja1O55176 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Pja1O55176 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pja1O55176 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pja1O55176 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pja1O55176 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pja1O55176 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pja1O55176 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pja1O55176 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pja1O55176 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pja1O55176 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.7■□□□□ 0.1
Pja1O55176 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pja1O55176 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pja1O55176 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pja1O55176 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pja1O55176 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.7■□□□□ 0.1
Pja1O55176 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pja1O55176 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Pja1O55176 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.7■□□□□ 0.1
Pja1O55176 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pja1O55176 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pja1O55176 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.7■□□□□ 0.1
Pja1O55176 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.7■□□□□ 0.1
Pja1O55176 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.7■□□□□ 0.1
Pja1O55176 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
Pja1O55176 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pja1O55176 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pja1O55176 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pja1O55176 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pja1O55176 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Pja1O55176 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pja1O55176 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pja1O55176 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pja1O55176 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pja1O55176 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pja1O55176 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pja1O55176 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pja1O55176 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pja1O55176 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pja1O55176 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pja1O55176 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms