Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf13O54965 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.52□□□□□ -0.25
Rnf13O54965 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Rnf13O54965 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf13O54965 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.52□□□□□ -0.25
Rnf13O54965 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf13O54965 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf13O54965 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.52□□□□□ -0.25
Rnf13O54965 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf13O54965 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf13O54965 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.52□□□□□ -0.25
Rnf13O54965 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf13O54965 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf13O54965 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf13O54965 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf13O54965 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf13O54965 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf13O54965 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Rnf13O54965 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf13O54965 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf13O54965 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf13O54965 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf13O54965 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf13O54965 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf13O54965 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Rnf13O54965 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Rnf13O54965 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf13O54965 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.51□□□□□ -0.25
Rnf13O54965 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf13O54965 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf13O54965 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.51□□□□□ -0.25
Rnf13O54965 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.51□□□□□ -0.25
Rnf13O54965 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf13O54965 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Rnf13O54965 Gm7284-201ENSMUST00000131667 944 ntBASIC13.51□□□□□ -0.25
Rnf13O54965 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf13O54965 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.51□□□□□ -0.25
Rnf13O54965 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Rnf13O54965 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf13O54965 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf13O54965 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf13O54965 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf13O54965 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf13O54965 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf13O54965 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf13O54965 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf13O54965 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf13O54965 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf13O54965 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf13O54965 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf13O54965 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf13O54965 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf13O54965 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.51□□□□□ -0.25
Rnf13O54965 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Rnf13O54965 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf13O54965 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Rnf13O54965 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf13O54965 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.5□□□□□ -0.25
Rnf13O54965 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf13O54965 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Rnf13O54965 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf13O54965 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf13O54965 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf13O54965 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf13O54965 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf13O54965 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf13O54965 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf13O54965 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.5□□□□□ -0.25
Rnf13O54965 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf13O54965 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Rnf13O54965 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf13O54965 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf13O54965 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Rnf13O54965 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf13O54965 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Rnf13O54965 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf13O54965 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf13O54965 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf13O54965 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf13O54965 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf13O54965 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf13O54965 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf13O54965 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf13O54965 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf13O54965 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf13O54965 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Rnf13O54965 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Rnf13O54965 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.5□□□□□ -0.25
Rnf13O54965 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf13O54965 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf13O54965 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Rnf13O54965 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf13O54965 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf13O54965 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf13O54965 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf13O54965 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf13O54965 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.49□□□□□ -0.25
Rnf13O54965 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf13O54965 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf13O54965 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms