Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Matn3O35701 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Matn3O35701 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Matn3O35701 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Matn3O35701 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Matn3O35701 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Matn3O35701 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Matn3O35701 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Matn3O35701 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Matn3O35701 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Matn3O35701 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Matn3O35701 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Matn3O35701 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Matn3O35701 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Matn3O35701 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Matn3O35701 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Matn3O35701 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Matn3O35701 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Matn3O35701 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Matn3O35701 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Matn3O35701 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.55□□□□□ -0.24
Matn3O35701 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Matn3O35701 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.55□□□□□ -0.24
Matn3O35701 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Matn3O35701 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Matn3O35701 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Matn3O35701 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Matn3O35701 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Matn3O35701 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Matn3O35701 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Matn3O35701 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Matn3O35701 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.54□□□□□ -0.24
Matn3O35701 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Matn3O35701 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Matn3O35701 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Matn3O35701 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Matn3O35701 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Matn3O35701 Celf4-206ENSMUST00000224553 1729 ntBASIC13.54□□□□□ -0.24
Matn3O35701 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Matn3O35701 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Matn3O35701 Gm14859-201ENSMUST00000117752 357 ntBASIC13.54□□□□□ -0.24
Matn3O35701 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Matn3O35701 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Matn3O35701 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Matn3O35701 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.54□□□□□ -0.24
Matn3O35701 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Matn3O35701 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Matn3O35701 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Matn3O35701 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Matn3O35701 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Matn3O35701 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.54□□□□□ -0.24
Matn3O35701 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Matn3O35701 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Matn3O35701 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Matn3O35701 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Matn3O35701 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Matn3O35701 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Matn3O35701 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Matn3O35701 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Matn3O35701 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Matn3O35701 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Matn3O35701 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Matn3O35701 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Matn3O35701 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Matn3O35701 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Matn3O35701 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Matn3O35701 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.53□□□□□ -0.24
Matn3O35701 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Matn3O35701 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Matn3O35701 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Matn3O35701 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Matn3O35701 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.53□□□□□ -0.24
Matn3O35701 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Matn3O35701 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.53□□□□□ -0.24
Matn3O35701 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Matn3O35701 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Matn3O35701 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Matn3O35701 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
Matn3O35701 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Matn3O35701 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Matn3O35701 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Matn3O35701 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Matn3O35701 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Matn3O35701 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Matn3O35701 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.53□□□□□ -0.24
Matn3O35701 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Matn3O35701 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Matn3O35701 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Matn3O35701 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Matn3O35701 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Matn3O35701 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Matn3O35701 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Matn3O35701 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Matn3O35701 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Matn3O35701 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Matn3O35701 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Matn3O35701 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.52□□□□□ -0.25
Matn3O35701 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.52□□□□□ -0.25
Matn3O35701 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Matn3O35701 Mir1668-201ENSMUST00000184114 107 ntBASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms