Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Gm43438-201ENSMUST00000198133 379 ntBASIC18.3■□□□□ 0.52
Dctn1O08788 AC090659.2-201ENSMUST00000225378 1186 ntBASIC18.3■□□□□ 0.52
Dctn1O08788 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dctn1O08788 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Dctn1O08788 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Dctn1O08788 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dctn1O08788 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Dctn1O08788 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dctn1O08788 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dctn1O08788 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dctn1O08788 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dctn1O08788 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dctn1O08788 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dctn1O08788 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dctn1O08788 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dctn1O08788 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dctn1O08788 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dctn1O08788 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dctn1O08788 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dctn1O08788 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC18.29■□□□□ 0.52
Dctn1O08788 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dctn1O08788 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Dctn1O08788 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Dctn1O08788 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC18.29■□□□□ 0.52
Dctn1O08788 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC18.29■□□□□ 0.52
Dctn1O08788 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Dctn1O08788 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dctn1O08788 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dctn1O08788 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dctn1O08788 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dctn1O08788 Prob1-201ENSMUST00000097619 3021 ntBASIC18.29■□□□□ 0.52
Dctn1O08788 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Dctn1O08788 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dctn1O08788 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dctn1O08788 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Dctn1O08788 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dctn1O08788 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Dctn1O08788 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dctn1O08788 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dctn1O08788 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Dctn1O08788 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dctn1O08788 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dctn1O08788 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dctn1O08788 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dctn1O08788 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dctn1O08788 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dctn1O08788 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dctn1O08788 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dctn1O08788 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.28■□□□□ 0.52
Dctn1O08788 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dctn1O08788 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dctn1O08788 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dctn1O08788 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dctn1O08788 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dctn1O08788 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dctn1O08788 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Dctn1O08788 Gm15321-201ENSMUST00000121290 288 ntBASIC18.27■□□□□ 0.52
Dctn1O08788 Mir1897-201ENSMUST00000122581 272 ntBASIC18.27■□□□□ 0.52
Dctn1O08788 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Dctn1O08788 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Dctn1O08788 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dctn1O08788 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dctn1O08788 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dctn1O08788 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dctn1O08788 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Dctn1O08788 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC18.27■□□□□ 0.52
Dctn1O08788 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dctn1O08788 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Dctn1O08788 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.27■□□□□ 0.52
Dctn1O08788 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Dctn1O08788 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.27■□□□□ 0.51
Dctn1O08788 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Dctn1O08788 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Dctn1O08788 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Dctn1O08788 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Dctn1O08788 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Dctn1O08788 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Dctn1O08788 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Dctn1O08788 Gm3365-201ENSMUST00000216296 1480 ntBASIC18.26■□□□□ 0.51
Dctn1O08788 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.26■□□□□ 0.51
Dctn1O08788 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18.26■□□□□ 0.51
Dctn1O08788 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dctn1O08788 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Dctn1O08788 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dctn1O08788 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dctn1O08788 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dctn1O08788 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Dctn1O08788 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC18.26■□□□□ 0.51
Dctn1O08788 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Dctn1O08788 Cd63-ps-201ENSMUST00000145417 875 ntBASIC18.26■□□□□ 0.51
Dctn1O08788 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC18.26■□□□□ 0.51
Dctn1O08788 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dctn1O08788 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Dctn1O08788 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC18.26■□□□□ 0.51
Dctn1O08788 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC18.26■□□□□ 0.51
Dctn1O08788 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC18.26■□□□□ 0.51
Dctn1O08788 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dctn1O08788 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC18.26■□□□□ 0.51
Dctn1O08788 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dctn1O08788 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms