Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim55G3X8Y1 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.34■□□□□ 0.05
Trim55G3X8Y1 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Trim55G3X8Y1 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim55G3X8Y1 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim55G3X8Y1 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim55G3X8Y1 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim55G3X8Y1 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim55G3X8Y1 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trim55G3X8Y1 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trim55G3X8Y1 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim55G3X8Y1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trim55G3X8Y1 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim55G3X8Y1 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Trim55G3X8Y1 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim55G3X8Y1 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim55G3X8Y1 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Trim55G3X8Y1 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
Trim55G3X8Y1 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim55G3X8Y1 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trim55G3X8Y1 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.33■□□□□ 0.04
Trim55G3X8Y1 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim55G3X8Y1 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim55G3X8Y1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim55G3X8Y1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.33■□□□□ 0.04
Trim55G3X8Y1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim55G3X8Y1 Gm37055-201ENSMUST00000191866 133 ntBASIC15.33■□□□□ 0.04
Trim55G3X8Y1 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.33■□□□□ 0.04
Trim55G3X8Y1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Trim55G3X8Y1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim55G3X8Y1 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.33■□□□□ 0.04
Trim55G3X8Y1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim55G3X8Y1 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trim55G3X8Y1 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim55G3X8Y1 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim55G3X8Y1 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim55G3X8Y1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim55G3X8Y1 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim55G3X8Y1 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim55G3X8Y1 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim55G3X8Y1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.33■□□□□ 0.04
Trim55G3X8Y1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim55G3X8Y1 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim55G3X8Y1 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim55G3X8Y1 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Trim55G3X8Y1 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim55G3X8Y1 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim55G3X8Y1 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim55G3X8Y1 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim55G3X8Y1 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Trim55G3X8Y1 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim55G3X8Y1 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim55G3X8Y1 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim55G3X8Y1 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim55G3X8Y1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.32■□□□□ 0.04
Trim55G3X8Y1 Gm13186-201ENSMUST00000118031 316 ntBASIC15.32■□□□□ 0.04
Trim55G3X8Y1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim55G3X8Y1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim55G3X8Y1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trim55G3X8Y1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trim55G3X8Y1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim55G3X8Y1 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim55G3X8Y1 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.32■□□□□ 0.04
Trim55G3X8Y1 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim55G3X8Y1 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim55G3X8Y1 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim55G3X8Y1 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim55G3X8Y1 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim55G3X8Y1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim55G3X8Y1 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trim55G3X8Y1 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim55G3X8Y1 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim55G3X8Y1 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim55G3X8Y1 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim55G3X8Y1 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim55G3X8Y1 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Trim55G3X8Y1 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim55G3X8Y1 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim55G3X8Y1 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim55G3X8Y1 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trim55G3X8Y1 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim55G3X8Y1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trim55G3X8Y1 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.31■□□□□ 0.04
Trim55G3X8Y1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim55G3X8Y1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim55G3X8Y1 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim55G3X8Y1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim55G3X8Y1 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.31■□□□□ 0.04
Trim55G3X8Y1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim55G3X8Y1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim55G3X8Y1 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim55G3X8Y1 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim55G3X8Y1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trim55G3X8Y1 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim55G3X8Y1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim55G3X8Y1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim55G3X8Y1 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trim55G3X8Y1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim55G3X8Y1 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim55G3X8Y1 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms