Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clip3B9EHT4 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Clip3B9EHT4 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clip3B9EHT4 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clip3B9EHT4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clip3B9EHT4 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clip3B9EHT4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Clip3B9EHT4 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Clip3B9EHT4 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clip3B9EHT4 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clip3B9EHT4 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clip3B9EHT4 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.45□□□□□ -0.1
Clip3B9EHT4 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.45□□□□□ -0.1
Clip3B9EHT4 Gm25925-201ENSMUST00000158314 306 ntBASIC14.45□□□□□ -0.1
Clip3B9EHT4 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clip3B9EHT4 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clip3B9EHT4 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clip3B9EHT4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Clip3B9EHT4 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clip3B9EHT4 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clip3B9EHT4 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clip3B9EHT4 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clip3B9EHT4 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clip3B9EHT4 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clip3B9EHT4 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.45□□□□□ -0.1
Clip3B9EHT4 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Clip3B9EHT4 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clip3B9EHT4 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clip3B9EHT4 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clip3B9EHT4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clip3B9EHT4 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Clip3B9EHT4 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clip3B9EHT4 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clip3B9EHT4 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Clip3B9EHT4 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.44□□□□□ -0.1
Clip3B9EHT4 Gm14722-201ENSMUST00000118943 689 ntBASIC14.44□□□□□ -0.1
Clip3B9EHT4 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clip3B9EHT4 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.44□□□□□ -0.1
Clip3B9EHT4 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clip3B9EHT4 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.44□□□□□ -0.1
Clip3B9EHT4 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Clip3B9EHT4 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clip3B9EHT4 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.43□□□□□ -0.1
Clip3B9EHT4 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clip3B9EHT4 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clip3B9EHT4 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clip3B9EHT4 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clip3B9EHT4 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.43□□□□□ -0.1
Clip3B9EHT4 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clip3B9EHT4 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.43□□□□□ -0.1
Clip3B9EHT4 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
Clip3B9EHT4 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Clip3B9EHT4 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clip3B9EHT4 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.43□□□□□ -0.1
Clip3B9EHT4 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clip3B9EHT4 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clip3B9EHT4 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clip3B9EHT4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clip3B9EHT4 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clip3B9EHT4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.43□□□□□ -0.1
Clip3B9EHT4 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Clip3B9EHT4 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clip3B9EHT4 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.43□□□□□ -0.1
Clip3B9EHT4 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clip3B9EHT4 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clip3B9EHT4 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clip3B9EHT4 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.43□□□□□ -0.1
Clip3B9EHT4 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clip3B9EHT4 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clip3B9EHT4 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms