Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Gm17807-201ENSMUST00000186869 298 ntBASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-1A0N8R1 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-1A0N8R1 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-1A0N8R1 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav12-1A0N8R1 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-1A0N8R1 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-1A0N8R1 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-1A0N8R1 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-1A0N8R1 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-1A0N8R1 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav12-1A0N8R1 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-1A0N8R1 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav12-1A0N8R1 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-1A0N8R1 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Trav12-1A0N8R1 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-1A0N8R1 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav12-1A0N8R1 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav12-1A0N8R1 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.42□□□□□ -0.42
Trav12-1A0N8R1 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-1A0N8R1 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Trav12-1A0N8R1 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav12-1A0N8R1 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-1A0N8R1 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-1A0N8R1 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav12-1A0N8R1 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav12-1A0N8R1 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-1A0N8R1 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-1A0N8R1 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-1A0N8R1 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-1A0N8R1 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-1A0N8R1 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav12-1A0N8R1 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms