Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gm37736-201ENSMUST00000193564 2802 ntBASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Gm43195-201ENSMUST00000200614 2332 ntBASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm11764-201ENSMUST00000120221 623 ntBASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 AC164629.2-201ENSMUST00000217916 270 ntBASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm15590-201ENSMUST00000078419 552 ntBASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm38318-201ENSMUST00000195769 1706 ntBASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm18195-201ENSMUST00000207604 706 ntBASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm13034-201ENSMUST00000121342 3177 ntBASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms