Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Gm45058-201ENSMUST00000205810 766 ntBASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Gm5417-201ENSMUST00000079706 384 ntBASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 Gm13436-201ENSMUST00000120418 567 ntBASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trbv3A0A0A6YYE2 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv3A0A0A6YYE2 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.46□□□□□ -0.57
Trbv3A0A0A6YYE2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv3A0A0A6YYE2 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv3A0A0A6YYE2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv3A0A0A6YYE2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv3A0A0A6YYE2 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv3A0A0A6YYE2 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv3A0A0A6YYE2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trbv3A0A0A6YYE2 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv3A0A0A6YYE2 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv3A0A0A6YYE2 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv3A0A0A6YYE2 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trbv3A0A0A6YYE2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv3A0A0A6YYE2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.46□□□□□ -0.57
Trbv3A0A0A6YYE2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv3A0A0A6YYE2 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv3A0A0A6YYE2 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv3A0A0A6YYE2 Gm8344-201ENSMUST00000119813 856 ntBASIC11.46□□□□□ -0.57
Trbv3A0A0A6YYE2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC11.46□□□□□ -0.57
Trbv3A0A0A6YYE2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.46□□□□□ -0.57
Trbv3A0A0A6YYE2 Gm43767-201ENSMUST00000198933 381 ntBASIC11.46□□□□□ -0.57
Trbv3A0A0A6YYE2 AC112142.1-201ENSMUST00000228796 918 ntBASIC11.46□□□□□ -0.57
Trbv3A0A0A6YYE2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv3A0A0A6YYE2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv3A0A0A6YYE2 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.46□□□□□ -0.57
Trbv3A0A0A6YYE2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv3A0A0A6YYE2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv3A0A0A6YYE2 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trbv3A0A0A6YYE2 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Trbv3A0A0A6YYE2 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.46□□□□□ -0.58
Trbv3A0A0A6YYE2 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.46□□□□□ -0.58
Trbv3A0A0A6YYE2 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trbv3A0A0A6YYE2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trbv3A0A0A6YYE2 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.58
Trbv3A0A0A6YYE2 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.46□□□□□ -0.58
Trbv3A0A0A6YYE2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trbv3A0A0A6YYE2 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trbv3A0A0A6YYE2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms