Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav21-dv12A0A075B6C4 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav21-dv12A0A075B6C4 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trav21-dv12A0A075B6C4 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav21-dv12A0A075B6C4 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav21-dv12A0A075B6C4 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav21-dv12A0A075B6C4 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.57
Trav21-dv12A0A075B6C4 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav21-dv12A0A075B6C4 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav21-dv12A0A075B6C4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav21-dv12A0A075B6C4 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav21-dv12A0A075B6C4 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav21-dv12A0A075B6C4 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav21-dv12A0A075B6C4 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav21-dv12A0A075B6C4 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm25990-201ENSMUST00000102440 86 ntBASIC11.46□□□□□ -0.57
Trav21-dv12A0A075B6C4 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm2308-201ENSMUST00000166539 1004 ntBASIC11.46□□□□□ -0.57
Trav21-dv12A0A075B6C4 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav21-dv12A0A075B6C4 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.46□□□□□ -0.57
Trav21-dv12A0A075B6C4 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav21-dv12A0A075B6C4 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav21-dv12A0A075B6C4 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav21-dv12A0A075B6C4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav21-dv12A0A075B6C4 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav21-dv12A0A075B6C4 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav21-dv12A0A075B6C4 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav21-dv12A0A075B6C4 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav21-dv12A0A075B6C4 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav21-dv12A0A075B6C4 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Trav21-dv12A0A075B6C4 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav21-dv12A0A075B6C4 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav21-dv12A0A075B6C4 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav21-dv12A0A075B6C4 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Trav21-dv12A0A075B6C4 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav21-dv12A0A075B6C4 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.46□□□□□ -0.58
Trav21-dv12A0A075B6C4 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav21-dv12A0A075B6C4 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Trav21-dv12A0A075B6C4 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Gm15173-201ENSMUST00000122049 433 ntBASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Gm37153-201ENSMUST00000193637 231 ntBASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Gm10459-201ENSMUST00000202708 1155 ntBASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 AC130671.1-201ENSMUST00000227384 1237 ntBASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav21-dv12A0A075B6C4 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms