Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm12620-201ENSMUST00000119791 1986 ntBASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm12612-201ENSMUST00000140182 1986 ntBASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm25745-201ENSMUST00000174945 133 ntBASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm10231-201ENSMUST00000181584 441 ntBASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm10175-202ENSMUST00000208752 441 ntBASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm38577-201ENSMUST00000221531 4545 ntBASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Fbxl12-205ENSMUST00000140702 1555 ntBASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Mir3081-201ENSMUST00000175305 84 ntBASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm18622-201ENSMUST00000219361 595 ntBASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm42632-201ENSMUST00000201707 2411 ntBASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-4-dv7A0A075B6C2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav13-4-dv7A0A075B6C2 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-4-dv7A0A075B6C2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-4-dv7A0A075B6C2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC10.27□□□□□ -0.77
Trav13-4-dv7A0A075B6C2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trav13-4-dv7A0A075B6C2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms