Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 Gm13418-201ENSMUST00000119097 944 ntBASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 Efs-202ENSMUST00000227037 2540 ntBASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav5-4A0A075B652 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 Gm44357-201ENSMUST00000195897 142 ntBASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 Gm19658-201ENSMUST00000196231 138 ntBASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 Gm44367-201ENSMUST00000196836 138 ntBASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 Gm44350-201ENSMUST00000197197 138 ntBASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 Gm44390-201ENSMUST00000197533 144 ntBASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 Gm44313-201ENSMUST00000198018 138 ntBASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 Gm44486-201ENSMUST00000198508 138 ntBASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 Gm44314-201ENSMUST00000199263 138 ntBASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 Gm44394-201ENSMUST00000199558 138 ntBASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 Gm44484-201ENSMUST00000199873 138 ntBASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 Gm44466-201ENSMUST00000200264 138 ntBASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 Gm44359-201ENSMUST00000200671 138 ntBASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5-4A0A075B652 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav5-4A0A075B652 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav5-4A0A075B652 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.46□□□□□ -0.41
Trav5-4A0A075B652 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5-4A0A075B652 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav5-4A0A075B652 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5-4A0A075B652 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5-4A0A075B652 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5-4A0A075B652 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5-4A0A075B652 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5-4A0A075B652 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5-4A0A075B652 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav5-4A0A075B652 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav5-4A0A075B652 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5-4A0A075B652 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5-4A0A075B652 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5-4A0A075B652 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5-4A0A075B652 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.46□□□□□ -0.41
Trav5-4A0A075B652 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.46□□□□□ -0.41
Trav5-4A0A075B652 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5-4A0A075B652 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav5-4A0A075B652 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5-4A0A075B652 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5-4A0A075B652 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav5-4A0A075B652 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav5-4A0A075B652 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.46□□□□□ -0.41
Trav5-4A0A075B652 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms