Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav5-1A0A075B5Z7 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav5-1A0A075B5Z7 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav5-1A0A075B5Z7 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav5-1A0A075B5Z7 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav5-1A0A075B5Z7 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav5-1A0A075B5Z7 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trav5-1A0A075B5Z7 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-1A0A075B5Z7 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-1A0A075B5Z7 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.77□□□□□ -0.37
Trav5-1A0A075B5Z7 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.77□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm38225-201ENSMUST00000194001 393 ntBASIC12.77□□□□□ -0.37
Trav5-1A0A075B5Z7 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm43474-201ENSMUST00000196415 774 ntBASIC12.77□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav5-1A0A075B5Z7 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-1A0A075B5Z7 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.77□□□□□ -0.37
Trav5-1A0A075B5Z7 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav5-1A0A075B5Z7 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-1A0A075B5Z7 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav5-1A0A075B5Z7 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.77□□□□□ -0.37
Trav5-1A0A075B5Z7 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-1A0A075B5Z7 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-1A0A075B5Z7 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-1A0A075B5Z7 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-1A0A075B5Z7 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav5-1A0A075B5Z7 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-1A0A075B5Z7 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-1A0A075B5Z7 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-1A0A075B5Z7 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-1A0A075B5Z7 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm24158-201ENSMUST00000175263 71 ntBASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-1A0A075B5Z7 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm22065-201ENSMUST00000103753 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm22066-201ENSMUST00000103761 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm24932-201ENSMUST00000103763 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm24115-201ENSMUST00000103799 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm22190-201ENSMUST00000103827 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm22191-201ENSMUST00000103831 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm24721-201ENSMUST00000103849 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm28018-201ENSMUST00000103869 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm26399-201ENSMUST00000103937 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms