Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC15.24■□□□□ 0.03
Speer3W4VSP1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.24■□□□□ 0.03
Speer3W4VSP1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.24■□□□□ 0.03
Speer3W4VSP1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.24■□□□□ 0.03
Speer3W4VSP1 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.24■□□□□ 0.03
Speer3W4VSP1 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Speer3W4VSP1 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Speer3W4VSP1 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.24■□□□□ 0.03
Speer3W4VSP1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Speer3W4VSP1 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Speer3W4VSP1 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.24■□□□□ 0.03
Speer3W4VSP1 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Speer3W4VSP1 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Speer3W4VSP1 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Speer3W4VSP1 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.24■□□□□ 0.03
Speer3W4VSP1 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Speer3W4VSP1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.24■□□□□ 0.03
Speer3W4VSP1 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Speer3W4VSP1 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Speer3W4VSP1 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Speer3W4VSP1 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Speer3W4VSP1 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Speer3W4VSP1 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Speer3W4VSP1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Speer3W4VSP1 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Speer3W4VSP1 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Speer3W4VSP1 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Speer3W4VSP1 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Speer3W4VSP1 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Speer3W4VSP1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Speer3W4VSP1 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Speer3W4VSP1 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Speer3W4VSP1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.23■□□□□ 0.03
Speer3W4VSP1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.23■□□□□ 0.03
Speer3W4VSP1 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.23■□□□□ 0.03
Speer3W4VSP1 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.23■□□□□ 0.03
Speer3W4VSP1 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Speer3W4VSP1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Speer3W4VSP1 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Speer3W4VSP1 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Speer3W4VSP1 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Speer3W4VSP1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Speer3W4VSP1 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Speer3W4VSP1 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Speer3W4VSP1 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Speer3W4VSP1 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.23■□□□□ 0.03
Speer3W4VSP1 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.23■□□□□ 0.03
Speer3W4VSP1 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Speer3W4VSP1 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Speer3W4VSP1 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Speer3W4VSP1 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Speer3W4VSP1 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Speer3W4VSP1 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC15.22■□□□□ 0.03
Speer3W4VSP1 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Speer3W4VSP1 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.22■□□□□ 0.03
Speer3W4VSP1 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Speer3W4VSP1 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Speer3W4VSP1 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Speer3W4VSP1 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Speer3W4VSP1 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Speer3W4VSP1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.22■□□□□ 0.03
Speer3W4VSP1 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Speer3W4VSP1 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.22■□□□□ 0.03
Speer3W4VSP1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Speer3W4VSP1 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Speer3W4VSP1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.22■□□□□ 0.03
Speer3W4VSP1 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Speer3W4VSP1 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Speer3W4VSP1 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Speer3W4VSP1 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Speer3W4VSP1 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Speer3W4VSP1 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Speer3W4VSP1 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Speer3W4VSP1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Speer3W4VSP1 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Speer3W4VSP1 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Speer3W4VSP1 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.21■□□□□ 0.03
Speer3W4VSP1 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.21■□□□□ 0.03
Speer3W4VSP1 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.21■□□□□ 0.03
Speer3W4VSP1 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.21■□□□□ 0.03
Speer3W4VSP1 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Speer3W4VSP1 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Speer3W4VSP1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Speer3W4VSP1 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Speer3W4VSP1 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Speer3W4VSP1 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.21■□□□□ 0.03
Speer3W4VSP1 Gm28033-201ENSMUST00000184224 96 ntBASIC15.21■□□□□ 0.03
Speer3W4VSP1 Gm7506-201ENSMUST00000207758 815 ntBASIC15.21■□□□□ 0.03
Speer3W4VSP1 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.21■□□□□ 0.03
Speer3W4VSP1 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.21■□□□□ 0.03
Speer3W4VSP1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Speer3W4VSP1 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Speer3W4VSP1 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Speer3W4VSP1 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Speer3W4VSP1 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Speer3W4VSP1 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.21■□□□□ 0.03
Speer3W4VSP1 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.21■□□□□ 0.03
Speer3W4VSP1 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Speer3W4VSP1 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Speer3W4VSP1 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms