Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.21■□□□□ 0.19
Nr1h3Q9Z0Y9 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nr1h3Q9Z0Y9 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nr1h3Q9Z0Y9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nr1h3Q9Z0Y9 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Nr1h3Q9Z0Y9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1h3Q9Z0Y9 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.2■□□□□ 0.18
Nr1h3Q9Z0Y9 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.2■□□□□ 0.18
Nr1h3Q9Z0Y9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1h3Q9Z0Y9 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Nr1h3Q9Z0Y9 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1h3Q9Z0Y9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1h3Q9Z0Y9 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.2■□□□□ 0.18
Nr1h3Q9Z0Y9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Nr1h3Q9Z0Y9 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.2■□□□□ 0.18
Nr1h3Q9Z0Y9 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1h3Q9Z0Y9 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.2■□□□□ 0.18
Nr1h3Q9Z0Y9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Nr1h3Q9Z0Y9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1h3Q9Z0Y9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1h3Q9Z0Y9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1h3Q9Z0Y9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1h3Q9Z0Y9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1h3Q9Z0Y9 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1h3Q9Z0Y9 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1h3Q9Z0Y9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1h3Q9Z0Y9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1h3Q9Z0Y9 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1h3Q9Z0Y9 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1h3Q9Z0Y9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1h3Q9Z0Y9 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Nr1h3Q9Z0Y9 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1h3Q9Z0Y9 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 Gm27622-201ENSMUST00000183779 60 ntBASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 Gm38225-201ENSMUST00000194001 393 ntBASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 Gm5779-201ENSMUST00000218467 910 ntBASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1h3Q9Z0Y9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h3Q9Z0Y9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h3Q9Z0Y9 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h3Q9Z0Y9 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h3Q9Z0Y9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h3Q9Z0Y9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h3Q9Z0Y9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.18■□□□□ 0.18
Nr1h3Q9Z0Y9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h3Q9Z0Y9 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.18■□□□□ 0.18
Nr1h3Q9Z0Y9 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.18■□□□□ 0.18
Nr1h3Q9Z0Y9 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.18■□□□□ 0.18
Nr1h3Q9Z0Y9 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h3Q9Z0Y9 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.18■□□□□ 0.18
Nr1h3Q9Z0Y9 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.18■□□□□ 0.18
Nr1h3Q9Z0Y9 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h3Q9Z0Y9 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h3Q9Z0Y9 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.18■□□□□ 0.18
Nr1h3Q9Z0Y9 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.18■□□□□ 0.18
Nr1h3Q9Z0Y9 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.18■□□□□ 0.18
Nr1h3Q9Z0Y9 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h3Q9Z0Y9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Nr1h3Q9Z0Y9 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h3Q9Z0Y9 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h3Q9Z0Y9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h3Q9Z0Y9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h3Q9Z0Y9 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h3Q9Z0Y9 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h3Q9Z0Y9 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h3Q9Z0Y9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h3Q9Z0Y9 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1h3Q9Z0Y9 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Nr1h3Q9Z0Y9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1h3Q9Z0Y9 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1h3Q9Z0Y9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1h3Q9Z0Y9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1h3Q9Z0Y9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1h3Q9Z0Y9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms