Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smarcb1Q9Z0H3 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smarcb1Q9Z0H3 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smarcb1Q9Z0H3 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smarcb1Q9Z0H3 Gm8749-201ENSMUST00000117737 331 ntBASIC15.43■□□□□ 0.06
Smarcb1Q9Z0H3 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.43■□□□□ 0.06
Smarcb1Q9Z0H3 Gm25144-201ENSMUST00000179561 110 ntBASIC15.43■□□□□ 0.06
Smarcb1Q9Z0H3 Gm25352-201ENSMUST00000179815 110 ntBASIC15.43■□□□□ 0.06
Smarcb1Q9Z0H3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smarcb1Q9Z0H3 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smarcb1Q9Z0H3 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smarcb1Q9Z0H3 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smarcb1Q9Z0H3 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Smarcb1Q9Z0H3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smarcb1Q9Z0H3 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Smarcb1Q9Z0H3 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.43■□□□□ 0.06
Smarcb1Q9Z0H3 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarcb1Q9Z0H3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarcb1Q9Z0H3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarcb1Q9Z0H3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarcb1Q9Z0H3 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarcb1Q9Z0H3 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarcb1Q9Z0H3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Smarcb1Q9Z0H3 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smarcb1Q9Z0H3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarcb1Q9Z0H3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Smarcb1Q9Z0H3 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.42■□□□□ 0.06
Smarcb1Q9Z0H3 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarcb1Q9Z0H3 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarcb1Q9Z0H3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarcb1Q9Z0H3 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarcb1Q9Z0H3 Gm45098-201ENSMUST00000207179 657 ntBASIC15.42■□□□□ 0.06
Smarcb1Q9Z0H3 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarcb1Q9Z0H3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarcb1Q9Z0H3 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smarcb1Q9Z0H3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarcb1Q9Z0H3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarcb1Q9Z0H3 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Gm13015-201ENSMUST00000118674 204 ntBASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcb1Q9Z0H3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Gm14057-201ENSMUST00000120631 482 ntBASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Gm27622-201ENSMUST00000183779 60 ntBASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Gm9182-201ENSMUST00000217829 639 ntBASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms