Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ap4s1Q9WVL1 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ap4s1Q9WVL1 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ap4s1Q9WVL1 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.31□□□□□ -0.12
Ap4s1Q9WVL1 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ap4s1Q9WVL1 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ap4s1Q9WVL1 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ap4s1Q9WVL1 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ap4s1Q9WVL1 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ap4s1Q9WVL1 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ap4s1Q9WVL1 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.31□□□□□ -0.12
Ap4s1Q9WVL1 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ap4s1Q9WVL1 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ap4s1Q9WVL1 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ap4s1Q9WVL1 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ap4s1Q9WVL1 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.3□□□□□ -0.12
Ap4s1Q9WVL1 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.3□□□□□ -0.12
Ap4s1Q9WVL1 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ap4s1Q9WVL1 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ap4s1Q9WVL1 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ap4s1Q9WVL1 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ap4s1Q9WVL1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.3□□□□□ -0.12
Ap4s1Q9WVL1 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ap4s1Q9WVL1 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ap4s1Q9WVL1 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ap4s1Q9WVL1 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ap4s1Q9WVL1 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ap4s1Q9WVL1 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ap4s1Q9WVL1 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ap4s1Q9WVL1 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ap4s1Q9WVL1 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ap4s1Q9WVL1 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ap4s1Q9WVL1 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ap4s1Q9WVL1 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.3□□□□□ -0.12
Ap4s1Q9WVL1 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ap4s1Q9WVL1 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Gm22697-201ENSMUST00000175194 63 ntBASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Gm7889-201ENSMUST00000185591 958 ntBASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Gm37055-201ENSMUST00000191866 133 ntBASIC14.28□□□□□ -0.12
Ap4s1Q9WVL1 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms