Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.41■□□□□ 0.22
Prpf40aQ9R1C7 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.41■□□□□ 0.22
Prpf40aQ9R1C7 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.41■□□□□ 0.22
Prpf40aQ9R1C7 Psmb5-202ENSMUST00000227257 622 ntBASIC16.41■□□□□ 0.22
Prpf40aQ9R1C7 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40aQ9R1C7 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40aQ9R1C7 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40aQ9R1C7 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40aQ9R1C7 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Prpf40aQ9R1C7 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40aQ9R1C7 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40aQ9R1C7 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40aQ9R1C7 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40aQ9R1C7 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40aQ9R1C7 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40aQ9R1C7 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40aQ9R1C7 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40aQ9R1C7 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.4■□□□□ 0.22
Prpf40aQ9R1C7 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40aQ9R1C7 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40aQ9R1C7 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40aQ9R1C7 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Prpf40aQ9R1C7 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40aQ9R1C7 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40aQ9R1C7 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40aQ9R1C7 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40aQ9R1C7 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40aQ9R1C7 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40aQ9R1C7 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40aQ9R1C7 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Prpf40aQ9R1C7 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Prpf40aQ9R1C7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Prpf40aQ9R1C7 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Prpf40aQ9R1C7 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40aQ9R1C7 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Prpf40aQ9R1C7 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40aQ9R1C7 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40aQ9R1C7 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Prpf40aQ9R1C7 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Prpf40aQ9R1C7 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 Gm14140-201ENSMUST00000119999 995 ntBASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40aQ9R1C7 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40aQ9R1C7 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40aQ9R1C7 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40aQ9R1C7 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40aQ9R1C7 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40aQ9R1C7 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40aQ9R1C7 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40aQ9R1C7 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40aQ9R1C7 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40aQ9R1C7 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40aQ9R1C7 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Prpf40aQ9R1C7 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40aQ9R1C7 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40aQ9R1C7 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40aQ9R1C7 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Prpf40aQ9R1C7 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Prpf40aQ9R1C7 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40aQ9R1C7 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.38■□□□□ 0.21
Prpf40aQ9R1C7 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40aQ9R1C7 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40aQ9R1C7 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Prpf40aQ9R1C7 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Prpf40aQ9R1C7 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40aQ9R1C7 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40aQ9R1C7 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40aQ9R1C7 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40aQ9R1C7 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.38■□□□□ 0.21
Prpf40aQ9R1C7 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms