Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Upk3aQ9JKX8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3aQ9JKX8 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3aQ9JKX8 Gm11594-201ENSMUST00000122313 162 ntBASIC14.33□□□□□ -0.12
Upk3aQ9JKX8 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3aQ9JKX8 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3aQ9JKX8 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.33□□□□□ -0.12
Upk3aQ9JKX8 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.33□□□□□ -0.12
Upk3aQ9JKX8 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Upk3aQ9JKX8 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.33□□□□□ -0.12
Upk3aQ9JKX8 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3aQ9JKX8 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3aQ9JKX8 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3aQ9JKX8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Upk3aQ9JKX8 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3aQ9JKX8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3aQ9JKX8 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.33□□□□□ -0.12
Upk3aQ9JKX8 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.33□□□□□ -0.12
Upk3aQ9JKX8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3aQ9JKX8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3aQ9JKX8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3aQ9JKX8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3aQ9JKX8 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.33□□□□□ -0.12
Upk3aQ9JKX8 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Upk3aQ9JKX8 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3aQ9JKX8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3aQ9JKX8 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3aQ9JKX8 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3aQ9JKX8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Carlr-201ENSMUST00000181515 2574 ntBASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Gm11025-201ENSMUST00000140773 466 ntBASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Upk3aQ9JKX8 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Gm15483-201ENSMUST00000120338 456 ntBASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Gm9726-201ENSMUST00000180321 678 ntBASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Gm2451-201ENSMUST00000199447 999 ntBASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Gm10290-201ENSMUST00000200451 999 ntBASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk3aQ9JKX8 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms