Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Gm33142-201ENSMUST00000193913 867 ntBASIC17.14■□□□□ 0.33
Ush1cQ9ES64 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ush1cQ9ES64 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ush1cQ9ES64 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ush1cQ9ES64 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ush1cQ9ES64 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ush1cQ9ES64 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ush1cQ9ES64 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ush1cQ9ES64 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ush1cQ9ES64 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ush1cQ9ES64 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.14■□□□□ 0.33
Ush1cQ9ES64 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ush1cQ9ES64 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Ush1cQ9ES64 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ush1cQ9ES64 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ush1cQ9ES64 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Gm6257-201ENSMUST00000163864 910 ntBASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Gm10052-201ENSMUST00000168019 960 ntBASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Gm44430-201ENSMUST00000203376 995 ntBASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Gm7729-201ENSMUST00000050143 801 ntBASIC17.13■□□□□ 0.33
Ush1cQ9ES64 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1cQ9ES64 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1cQ9ES64 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1cQ9ES64 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1cQ9ES64 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1cQ9ES64 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1cQ9ES64 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1cQ9ES64 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1cQ9ES64 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ush1cQ9ES64 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.11■□□□□ 0.33
Ush1cQ9ES64 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1cQ9ES64 Mir6404-201ENSMUST00000183699 94 ntBASIC17.11■□□□□ 0.33
Ush1cQ9ES64 Gm5587-201ENSMUST00000206270 674 ntBASIC17.11■□□□□ 0.33
Ush1cQ9ES64 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.11■□□□□ 0.33
Ush1cQ9ES64 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1cQ9ES64 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms