Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube3bQ9ES34 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube3bQ9ES34 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube3bQ9ES34 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube3bQ9ES34 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.69■□□□□ 0.42
Ube3bQ9ES34 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube3bQ9ES34 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ube3bQ9ES34 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.69■□□□□ 0.42
Ube3bQ9ES34 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.69■□□□□ 0.42
Ube3bQ9ES34 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube3bQ9ES34 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube3bQ9ES34 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube3bQ9ES34 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube3bQ9ES34 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube3bQ9ES34 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube3bQ9ES34 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3bQ9ES34 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3bQ9ES34 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.68■□□□□ 0.42
Ube3bQ9ES34 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Ube3bQ9ES34 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3bQ9ES34 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3bQ9ES34 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3bQ9ES34 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3bQ9ES34 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ube3bQ9ES34 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.68■□□□□ 0.42
Ube3bQ9ES34 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3bQ9ES34 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3bQ9ES34 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ube3bQ9ES34 Gm13015-201ENSMUST00000118674 204 ntBASIC17.68■□□□□ 0.42
Ube3bQ9ES34 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.68■□□□□ 0.42
Ube3bQ9ES34 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3bQ9ES34 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.68■□□□□ 0.42
Ube3bQ9ES34 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.68■□□□□ 0.42
Ube3bQ9ES34 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3bQ9ES34 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3bQ9ES34 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ube3bQ9ES34 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3bQ9ES34 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3bQ9ES34 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3bQ9ES34 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3bQ9ES34 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3bQ9ES34 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3bQ9ES34 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3bQ9ES34 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Gm15693-201ENSMUST00000120470 637 ntBASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Gm9824-201ENSMUST00000178707 561 ntBASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Gm9726-201ENSMUST00000180321 678 ntBASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Olfr286-202ENSMUST00000205305 969 ntBASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Gm45098-201ENSMUST00000207179 657 ntBASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Gm5779-201ENSMUST00000218467 910 ntBASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3bQ9ES34 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ube3bQ9ES34 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube3bQ9ES34 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Ube3bQ9ES34 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Ube3bQ9ES34 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Ube3bQ9ES34 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube3bQ9ES34 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ube3bQ9ES34 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.66■□□□□ 0.42
Ube3bQ9ES34 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ube3bQ9ES34 Gm25925-201ENSMUST00000158314 306 ntBASIC17.66■□□□□ 0.42
Ube3bQ9ES34 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.66■□□□□ 0.42
Ube3bQ9ES34 Mir6956-201ENSMUST00000183598 62 ntBASIC17.66■□□□□ 0.42
Ube3bQ9ES34 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.66■□□□□ 0.42
Ube3bQ9ES34 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.66■□□□□ 0.42
Ube3bQ9ES34 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.66■□□□□ 0.42
Ube3bQ9ES34 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube3bQ9ES34 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ube3bQ9ES34 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube3bQ9ES34 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms