Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube4bQ9ES00 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Ube4bQ9ES00 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube4bQ9ES00 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
Ube4bQ9ES00 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube4bQ9ES00 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ube4bQ9ES00 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube4bQ9ES00 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ube4bQ9ES00 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube4bQ9ES00 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube4bQ9ES00 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 Gm12008-201ENSMUST00000117791 755 ntBASIC14.36□□□□□ -0.11
Ube4bQ9ES00 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4bQ9ES00 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Gm22697-201ENSMUST00000175194 63 ntBASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Gm18101-201ENSMUST00000215769 548 ntBASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Gm21559-201ENSMUST00000220638 855 ntBASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Gm8587-201ENSMUST00000076538 843 ntBASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4bQ9ES00 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms