Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf1Q9EPU4 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf1Q9EPU4 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf1Q9EPU4 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf1Q9EPU4 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf1Q9EPU4 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf1Q9EPU4 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf1Q9EPU4 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf1Q9EPU4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf1Q9EPU4 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Cpsf1Q9EPU4 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Cpsf1Q9EPU4 Gm14042-201ENSMUST00000120139 833 ntBASIC20.4■□□□□ 0.86
Cpsf1Q9EPU4 Gm14767-201ENSMUST00000121559 586 ntBASIC20.4■□□□□ 0.86
Cpsf1Q9EPU4 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC20.4■□□□□ 0.86
Cpsf1Q9EPU4 Gm23547-201ENSMUST00000158210 271 ntBASIC20.4■□□□□ 0.86
Cpsf1Q9EPU4 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC20.4■□□□□ 0.86
Cpsf1Q9EPU4 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC20.4■□□□□ 0.86
Cpsf1Q9EPU4 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf1Q9EPU4 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf1Q9EPU4 BC001981-202ENSMUST00000191393 1545 ntBASIC20.4■□□□□ 0.86
Cpsf1Q9EPU4 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf1Q9EPU4 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf1Q9EPU4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf1Q9EPU4 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf1Q9EPU4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf1Q9EPU4 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf1Q9EPU4 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf1Q9EPU4 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf1Q9EPU4 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cpsf1Q9EPU4 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cpsf1Q9EPU4 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Cpsf1Q9EPU4 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpsf1Q9EPU4 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpsf1Q9EPU4 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpsf1Q9EPU4 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Cpsf1Q9EPU4 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
Cpsf1Q9EPU4 Gm5626-201ENSMUST00000222151 1058 ntBASIC20.39■□□□□ 0.85
Cpsf1Q9EPU4 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC20.39■□□□□ 0.85
Cpsf1Q9EPU4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpsf1Q9EPU4 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpsf1Q9EPU4 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpsf1Q9EPU4 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpsf1Q9EPU4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpsf1Q9EPU4 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpsf1Q9EPU4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpsf1Q9EPU4 Gm14451-201ENSMUST00000121581 1542 ntBASIC20.38■□□□□ 0.85
Cpsf1Q9EPU4 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf1Q9EPU4 Gm11960-202ENSMUST00000181063 2858 ntBASIC20.38■□□□□ 0.85
Cpsf1Q9EPU4 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf1Q9EPU4 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf1Q9EPU4 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf1Q9EPU4 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf1Q9EPU4 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf1Q9EPU4 Mir8102-201ENSMUST00000184148 139 ntBASIC20.38■□□□□ 0.85
Cpsf1Q9EPU4 Mir6977-201ENSMUST00000184960 64 ntBASIC20.38■□□□□ 0.85
Cpsf1Q9EPU4 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC20.38■□□□□ 0.85
Cpsf1Q9EPU4 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf1Q9EPU4 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf1Q9EPU4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Cpsf1Q9EPU4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf1Q9EPU4 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf1Q9EPU4 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Cpsf1Q9EPU4 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Cpsf1Q9EPU4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Cpsf1Q9EPU4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf1Q9EPU4 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf1Q9EPU4 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 Gm42632-201ENSMUST00000201707 2411 ntBASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 Gm8410-201ENSMUST00000117225 605 ntBASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 Gm14719-201ENSMUST00000121891 340 ntBASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 Gm17837-201ENSMUST00000186435 985 ntBASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 AC090659.2-201ENSMUST00000225378 1186 ntBASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 CT025535.1-201ENSMUST00000227172 491 ntBASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf1Q9EPU4 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Cpsf1Q9EPU4 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC20.36■□□□□ 0.85
Cpsf1Q9EPU4 AC132863.2-201ENSMUST00000226643 799 ntBASIC20.36■□□□□ 0.85
Cpsf1Q9EPU4 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms