Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rrp8Q9DB85 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.57□□□□□ -0.08
Rrp8Q9DB85 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rrp8Q9DB85 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rrp8Q9DB85 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rrp8Q9DB85 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rrp8Q9DB85 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rrp8Q9DB85 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rrp8Q9DB85 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Rrp8Q9DB85 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rrp8Q9DB85 Gm7488-201ENSMUST00000117148 684 ntBASIC14.57□□□□□ -0.08
Rrp8Q9DB85 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rrp8Q9DB85 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.57□□□□□ -0.08
Rrp8Q9DB85 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.57□□□□□ -0.08
Rrp8Q9DB85 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.57□□□□□ -0.08
Rrp8Q9DB85 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rrp8Q9DB85 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Rrp8Q9DB85 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rrp8Q9DB85 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rrp8Q9DB85 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.57□□□□□ -0.08
Rrp8Q9DB85 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rrp8Q9DB85 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.57□□□□□ -0.08
Rrp8Q9DB85 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rrp8Q9DB85 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rrp8Q9DB85 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.57□□□□□ -0.08
Rrp8Q9DB85 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rrp8Q9DB85 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rrp8Q9DB85 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rrp8Q9DB85 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rrp8Q9DB85 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Gm27533-201ENSMUST00000183800 152 ntBASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Gm44855-201ENSMUST00000205725 362 ntBASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rrp8Q9DB85 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rrp8Q9DB85 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rrp8Q9DB85 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Rrp8Q9DB85 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Rrp8Q9DB85 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rrp8Q9DB85 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rrp8Q9DB85 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rrp8Q9DB85 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rrp8Q9DB85 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rrp8Q9DB85 Gm14719-201ENSMUST00000121891 340 ntBASIC14.55□□□□□ -0.08
Rrp8Q9DB85 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.55□□□□□ -0.08
Rrp8Q9DB85 Gm15487-201ENSMUST00000122373 465 ntBASIC14.55□□□□□ -0.08
Rrp8Q9DB85 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rrp8Q9DB85 Gm27680-201ENSMUST00000184192 160 ntBASIC14.55□□□□□ -0.08
Rrp8Q9DB85 Gm27838-201ENSMUST00000184829 128 ntBASIC14.55□□□□□ -0.08
Rrp8Q9DB85 Gm43767-201ENSMUST00000198933 381 ntBASIC14.55□□□□□ -0.08
Rrp8Q9DB85 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.55□□□□□ -0.08
Rrp8Q9DB85 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.55□□□□□ -0.08
Rrp8Q9DB85 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.55□□□□□ -0.08
Rrp8Q9DB85 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rrp8Q9DB85 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rrp8Q9DB85 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.55□□□□□ -0.08
Rrp8Q9DB85 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rrp8Q9DB85 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.55□□□□□ -0.08
Rrp8Q9DB85 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rrp8Q9DB85 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rrp8Q9DB85 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rrp8Q9DB85 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Rrp8Q9DB85 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rrp8Q9DB85 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rrp8Q9DB85 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rrp8Q9DB85 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rrp8Q9DB85 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.54□□□□□ -0.08
Rrp8Q9DB85 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rrp8Q9DB85 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rrp8Q9DB85 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Rrp8Q9DB85 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rrp8Q9DB85 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms