Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm14701-201ENSMUST00000117156 348 ntBASIC19.6■□□□□ 0.73
U2af1Q9D883 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC19.6■□□□□ 0.73
U2af1Q9D883 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC19.6■□□□□ 0.73
U2af1Q9D883 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
U2af1Q9D883 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC19.6■□□□□ 0.73
U2af1Q9D883 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC19.6■□□□□ 0.73
U2af1Q9D883 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
U2af1Q9D883 Gm14780-201ENSMUST00000118387 2737 ntBASIC19.6■□□□□ 0.73
U2af1Q9D883 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
U2af1Q9D883 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
U2af1Q9D883 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
U2af1Q9D883 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
U2af1Q9D883 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
U2af1Q9D883 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
U2af1Q9D883 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
U2af1Q9D883 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
U2af1Q9D883 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
U2af1Q9D883 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
U2af1Q9D883 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
U2af1Q9D883 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
U2af1Q9D883 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
U2af1Q9D883 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
U2af1Q9D883 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC19.59■□□□□ 0.73
U2af1Q9D883 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC19.59■□□□□ 0.73
U2af1Q9D883 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
U2af1Q9D883 AC166341.4-201ENSMUST00000220625 123 ntBASIC19.59■□□□□ 0.73
U2af1Q9D883 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
U2af1Q9D883 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
U2af1Q9D883 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
U2af1Q9D883 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
U2af1Q9D883 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
U2af1Q9D883 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
U2af1Q9D883 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
U2af1Q9D883 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
U2af1Q9D883 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
U2af1Q9D883 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.73
U2af1Q9D883 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
U2af1Q9D883 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
U2af1Q9D883 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC19.58■□□□□ 0.73
U2af1Q9D883 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
U2af1Q9D883 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
U2af1Q9D883 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
U2af1Q9D883 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
U2af1Q9D883 Gm43474-201ENSMUST00000196415 774 ntBASIC19.58■□□□□ 0.72
U2af1Q9D883 Gm8396-201ENSMUST00000057361 823 ntBASIC19.58■□□□□ 0.72
U2af1Q9D883 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
U2af1Q9D883 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
U2af1Q9D883 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
U2af1Q9D883 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC19.58■□□□□ 0.72
U2af1Q9D883 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
U2af1Q9D883 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
U2af1Q9D883 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
U2af1Q9D883 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
U2af1Q9D883 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
U2af1Q9D883 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
U2af1Q9D883 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
U2af1Q9D883 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
U2af1Q9D883 CT025626.1-201ENSMUST00000223735 1455 ntBASIC19.57■□□□□ 0.72
U2af1Q9D883 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC19.57■□□□□ 0.72
U2af1Q9D883 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
U2af1Q9D883 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC19.57■□□□□ 0.72
U2af1Q9D883 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC19.57■□□□□ 0.72
U2af1Q9D883 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC19.57■□□□□ 0.72
U2af1Q9D883 Gm43125-201ENSMUST00000201724 730 ntBASIC19.57■□□□□ 0.72
U2af1Q9D883 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
U2af1Q9D883 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.57■□□□□ 0.72
U2af1Q9D883 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
U2af1Q9D883 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
U2af1Q9D883 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
U2af1Q9D883 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
U2af1Q9D883 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
U2af1Q9D883 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC19.57■□□□□ 0.72
U2af1Q9D883 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
U2af1Q9D883 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
U2af1Q9D883 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
U2af1Q9D883 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
U2af1Q9D883 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
U2af1Q9D883 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
U2af1Q9D883 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
U2af1Q9D883 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
U2af1Q9D883 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC19.56■□□□□ 0.72
U2af1Q9D883 AC164565.1-201ENSMUST00000217520 1484 ntBASIC19.56■□□□□ 0.72
U2af1Q9D883 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC19.56■□□□□ 0.72
U2af1Q9D883 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
U2af1Q9D883 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
U2af1Q9D883 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
U2af1Q9D883 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
U2af1Q9D883 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC19.56■□□□□ 0.72
U2af1Q9D883 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
U2af1Q9D883 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
U2af1Q9D883 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
U2af1Q9D883 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
U2af1Q9D883 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC19.56■□□□□ 0.72
U2af1Q9D883 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
U2af1Q9D883 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
U2af1Q9D883 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
U2af1Q9D883 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
U2af1Q9D883 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
U2af1Q9D883 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
U2af1Q9D883 Gm21009-201ENSMUST00000197169 1669 ntBASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms