Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ccdc7Q9D541 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc7Q9D541 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc7Q9D541 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc7Q9D541 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc7Q9D541 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc7Q9D541 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc7Q9D541 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Ccdc7Q9D541 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc7Q9D541 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ccdc7Q9D541 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc7Q9D541 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc7Q9D541 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc7Q9D541 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc7Q9D541 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.43■□□□□ 0.38
Ccdc7Q9D541 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ccdc7Q9D541 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ccdc7Q9D541 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.43■□□□□ 0.38
Ccdc7Q9D541 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc7Q9D541 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc7Q9D541 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc7Q9D541 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc7Q9D541 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Ccdc7Q9D541 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc7Q9D541 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.43■□□□□ 0.38
Ccdc7Q9D541 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc7Q9D541 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc7Q9D541 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ccdc7Q9D541 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc7Q9D541 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Ccdc7Q9D541 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc7Q9D541 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc7Q9D541 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc7Q9D541 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc7Q9D541 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc7Q9D541 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc7Q9D541 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc7Q9D541 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc7Q9D541 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.42■□□□□ 0.38
Ccdc7Q9D541 Gm13036-201ENSMUST00000117799 748 ntBASIC17.42■□□□□ 0.38
Ccdc7Q9D541 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc7Q9D541 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.42■□□□□ 0.38
Ccdc7Q9D541 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc7Q9D541 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.42■□□□□ 0.38
Ccdc7Q9D541 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc7Q9D541 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc7Q9D541 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc7Q9D541 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc7Q9D541 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc7Q9D541 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.42■□□□□ 0.38
Ccdc7Q9D541 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.42■□□□□ 0.38
Ccdc7Q9D541 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc7Q9D541 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc7Q9D541 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc7Q9D541 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ccdc7Q9D541 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc7Q9D541 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc7Q9D541 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc7Q9D541 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc7Q9D541 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc7Q9D541 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc7Q9D541 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc7Q9D541 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc7Q9D541 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc7Q9D541 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc7Q9D541 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc7Q9D541 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc7Q9D541 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc7Q9D541 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc7Q9D541 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.41■□□□□ 0.38
Ccdc7Q9D541 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.41■□□□□ 0.38
Ccdc7Q9D541 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.41■□□□□ 0.38
Ccdc7Q9D541 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc7Q9D541 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ccdc7Q9D541 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc7Q9D541 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.41■□□□□ 0.38
Ccdc7Q9D541 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc7Q9D541 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ccdc7Q9D541 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc7Q9D541 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.41■□□□□ 0.38
Ccdc7Q9D541 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc7Q9D541 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc7Q9D541 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc7Q9D541 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc7Q9D541 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc7Q9D541 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc7Q9D541 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc7Q9D541 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc7Q9D541 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc7Q9D541 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc7Q9D541 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc7Q9D541 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc7Q9D541 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc7Q9D541 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc7Q9D541 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.4■□□□□ 0.38
Ccdc7Q9D541 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.4■□□□□ 0.38
Ccdc7Q9D541 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc7Q9D541 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc7Q9D541 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc7Q9D541 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms