Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Stag1Q9D3E6 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Stag1Q9D3E6 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Stag1Q9D3E6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.73■□□□□ 0.43
Stag1Q9D3E6 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Stag1Q9D3E6 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Stag1Q9D3E6 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.73■□□□□ 0.43
Stag1Q9D3E6 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Stag1Q9D3E6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Stag1Q9D3E6 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Stag1Q9D3E6 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Stag1Q9D3E6 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Stag1Q9D3E6 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Stag1Q9D3E6 Gm12151-201ENSMUST00000121374 290 ntBASIC17.73■□□□□ 0.43
Stag1Q9D3E6 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Stag1Q9D3E6 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Stag1Q9D3E6 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.73■□□□□ 0.43
Stag1Q9D3E6 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.73■□□□□ 0.43
Stag1Q9D3E6 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Stag1Q9D3E6 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Stag1Q9D3E6 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Stag1Q9D3E6 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Stag1Q9D3E6 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Stag1Q9D3E6 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Stag1Q9D3E6 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.73■□□□□ 0.43
Stag1Q9D3E6 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Stag1Q9D3E6 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Stag1Q9D3E6 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Stag1Q9D3E6 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Stag1Q9D3E6 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Gm13453-201ENSMUST00000118708 357 ntBASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Gm18766-201ENSMUST00000189811 808 ntBASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Stag1Q9D3E6 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stag1Q9D3E6 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stag1Q9D3E6 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Stag1Q9D3E6 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stag1Q9D3E6 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stag1Q9D3E6 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stag1Q9D3E6 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stag1Q9D3E6 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stag1Q9D3E6 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Stag1Q9D3E6 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.71■□□□□ 0.43
Stag1Q9D3E6 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Stag1Q9D3E6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stag1Q9D3E6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stag1Q9D3E6 Gm12428-201ENSMUST00000119844 727 ntBASIC17.71■□□□□ 0.43
Stag1Q9D3E6 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Stag1Q9D3E6 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.71■□□□□ 0.43
Stag1Q9D3E6 Gm28630-201ENSMUST00000187806 498 ntBASIC17.71■□□□□ 0.43
Stag1Q9D3E6 Gm6888-201ENSMUST00000221983 706 ntBASIC17.71■□□□□ 0.43
Stag1Q9D3E6 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stag1Q9D3E6 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.71■□□□□ 0.43
Stag1Q9D3E6 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stag1Q9D3E6 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Stag1Q9D3E6 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Stag1Q9D3E6 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stag1Q9D3E6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Stag1Q9D3E6 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Stag1Q9D3E6 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stag1Q9D3E6 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Stag1Q9D3E6 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stag1Q9D3E6 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Stag1Q9D3E6 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Stag1Q9D3E6 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Stag1Q9D3E6 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Stag1Q9D3E6 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Stag1Q9D3E6 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Stag1Q9D3E6 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Stag1Q9D3E6 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Stag1Q9D3E6 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Stag1Q9D3E6 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Stag1Q9D3E6 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Stag1Q9D3E6 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms