Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Sft2d3Q9CSV6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sft2d3Q9CSV6 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sft2d3Q9CSV6 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.75□□□□□ -0.37
Sft2d3Q9CSV6 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sft2d3Q9CSV6 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 Gm9682-201ENSMUST00000197505 556 ntBASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sft2d3Q9CSV6 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Gm12134-201ENSMUST00000122109 520 ntBASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sft2d3Q9CSV6 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Sft2d3Q9CSV6 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sft2d3Q9CSV6 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Sft2d3Q9CSV6 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sft2d3Q9CSV6 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sft2d3Q9CSV6 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sft2d3Q9CSV6 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Sft2d3Q9CSV6 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sft2d3Q9CSV6 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Sft2d3Q9CSV6 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sft2d3Q9CSV6 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.72□□□□□ -0.37
Sft2d3Q9CSV6 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sft2d3Q9CSV6 Gm6736-201ENSMUST00000166583 948 ntBASIC12.72□□□□□ -0.37
Sft2d3Q9CSV6 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.72□□□□□ -0.37
Sft2d3Q9CSV6 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sft2d3Q9CSV6 Gm4899-201ENSMUST00000178708 719 ntBASIC12.72□□□□□ -0.37
Sft2d3Q9CSV6 Mir8117-201ENSMUST00000184773 107 ntBASIC12.72□□□□□ -0.37
Sft2d3Q9CSV6 Gm2756-201ENSMUST00000195851 400 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms