Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chchd1Q9CQA6 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chchd1Q9CQA6 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.28□□□□□ -0.6
Chchd1Q9CQA6 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chchd1Q9CQA6 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Chchd1Q9CQA6 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chchd1Q9CQA6 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chchd1Q9CQA6 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Chchd1Q9CQA6 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chchd1Q9CQA6 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chchd1Q9CQA6 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chchd1Q9CQA6 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chchd1Q9CQA6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chchd1Q9CQA6 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chchd1Q9CQA6 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chchd1Q9CQA6 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chchd1Q9CQA6 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chchd1Q9CQA6 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chchd1Q9CQA6 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chchd1Q9CQA6 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Chchd1Q9CQA6 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Chchd1Q9CQA6 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chchd1Q9CQA6 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chchd1Q9CQA6 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Chchd1Q9CQA6 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chchd1Q9CQA6 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.27□□□□□ -0.6
Chchd1Q9CQA6 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chchd1Q9CQA6 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chchd1Q9CQA6 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chchd1Q9CQA6 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chchd1Q9CQA6 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chchd1Q9CQA6 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Chchd1Q9CQA6 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chchd1Q9CQA6 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chchd1Q9CQA6 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chchd1Q9CQA6 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Chchd1Q9CQA6 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chchd1Q9CQA6 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chchd1Q9CQA6 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chchd1Q9CQA6 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chchd1Q9CQA6 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chchd1Q9CQA6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Chchd1Q9CQA6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC11.27□□□□□ -0.61
Chchd1Q9CQA6 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC11.27□□□□□ -0.61
Chchd1Q9CQA6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chchd1Q9CQA6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chchd1Q9CQA6 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Chchd1Q9CQA6 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chchd1Q9CQA6 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Chchd1Q9CQA6 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chchd1Q9CQA6 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.27□□□□□ -0.61
Chchd1Q9CQA6 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chchd1Q9CQA6 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chchd1Q9CQA6 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chchd1Q9CQA6 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chchd1Q9CQA6 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Chchd1Q9CQA6 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Chchd1Q9CQA6 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Gm2559-201ENSMUST00000201323 363 ntBASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Gm43034-201ENSMUST00000198678 1364 ntBASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chchd1Q9CQA6 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chchd1Q9CQA6 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chchd1Q9CQA6 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chchd1Q9CQA6 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chchd1Q9CQA6 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC11.25□□□□□ -0.61
Chchd1Q9CQA6 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chchd1Q9CQA6 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chchd1Q9CQA6 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Chchd1Q9CQA6 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chchd1Q9CQA6 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms