Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Gm6222-201ENSMUST00000120787 396 ntBASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh23Q99PF4 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh23Q99PF4 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Gm6091-201ENSMUST00000098307 165 ntBASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh23Q99PF4 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cdh23Q99PF4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh23Q99PF4 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh23Q99PF4 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.97□□□□□ -0.01
Cdh23Q99PF4 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh23Q99PF4 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh23Q99PF4 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh23Q99PF4 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Cdh23Q99PF4 Gm13350-201ENSMUST00000120519 479 ntBASIC14.97□□□□□ -0.01
Cdh23Q99PF4 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.97□□□□□ -0.01
Cdh23Q99PF4 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.97□□□□□ -0.01
Cdh23Q99PF4 Gm27514-201ENSMUST00000183692 110 ntBASIC14.97□□□□□ -0.01
Cdh23Q99PF4 Gm17794-201ENSMUST00000220252 955 ntBASIC14.97□□□□□ -0.01
Cdh23Q99PF4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh23Q99PF4 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh23Q99PF4 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh23Q99PF4 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh23Q99PF4 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cdh23Q99PF4 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.97□□□□□ -0.01
Cdh23Q99PF4 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh23Q99PF4 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh23Q99PF4 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh23Q99PF4 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh23Q99PF4 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh23Q99PF4 Gm7584-201ENSMUST00000175829 940 ntBASIC14.97□□□□□ -0.01
Cdh23Q99PF4 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh23Q99PF4 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh23Q99PF4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh23Q99PF4 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh23Q99PF4 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.96□□□□□ -0.01
Cdh23Q99PF4 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.96□□□□□ -0.01
Cdh23Q99PF4 Mir7654-201ENSMUST00000185082 70 ntBASIC14.96□□□□□ -0.01
Cdh23Q99PF4 Gm18054-201ENSMUST00000207539 555 ntBASIC14.96□□□□□ -0.01
Cdh23Q99PF4 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Cdh23Q99PF4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh23Q99PF4 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh23Q99PF4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh23Q99PF4 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.96□□□□□ -0.01
Cdh23Q99PF4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh23Q99PF4 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh23Q99PF4 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh23Q99PF4 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh23Q99PF4 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh23Q99PF4 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Cdh23Q99PF4 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh23Q99PF4 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.96□□□□□ -0.01
Cdh23Q99PF4 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
Cdh23Q99PF4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Cdh23Q99PF4 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.96□□□□□ -0.02
Cdh23Q99PF4 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Cdh23Q99PF4 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.96□□□□□ -0.02
Cdh23Q99PF4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cdh23Q99PF4 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdh23Q99PF4 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
Cdh23Q99PF4 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cdh23Q99PF4 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cdh23Q99PF4 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdh23Q99PF4 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdh23Q99PF4 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdh23Q99PF4 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Cdh23Q99PF4 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdh23Q99PF4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdh23Q99PF4 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cdh23Q99PF4 BC001981-202ENSMUST00000191393 1545 ntBASIC14.95□□□□□ -0.02
Cdh23Q99PF4 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
Cdh23Q99PF4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Cdh23Q99PF4 Gm5479-201ENSMUST00000160578 435 ntBASIC14.95□□□□□ -0.02
Cdh23Q99PF4 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.95□□□□□ -0.02
Cdh23Q99PF4 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.95□□□□□ -0.02
Cdh23Q99PF4 Mir125a-201ENSMUST00000083545 68 ntBASIC14.95□□□□□ -0.02
Cdh23Q99PF4 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.95□□□□□ -0.02
Cdh23Q99PF4 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Cdh23Q99PF4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdh23Q99PF4 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms