Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Gm7230-201ENSMUST00000173026 815 ntBASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Gm44771-201ENSMUST00000206975 626 ntBASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp1b1Q99LU0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Gm6550-201ENSMUST00000187574 993 ntBASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Gm37153-201ENSMUST00000193637 231 ntBASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Gm10060-201ENSMUST00000212002 111 ntBASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Chmp1b1Q99LU0 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Chmp1b1Q99LU0 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp1b1Q99LU0 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp1b1Q99LU0 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.1□□□□□ -0.15
Chmp1b1Q99LU0 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.1□□□□□ -0.15
Chmp1b1Q99LU0 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp1b1Q99LU0 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp1b1Q99LU0 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Chmp1b1Q99LU0 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp1b1Q99LU0 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp1b1Q99LU0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.1□□□□□ -0.15
Chmp1b1Q99LU0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp1b1Q99LU0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.1□□□□□ -0.15
Chmp1b1Q99LU0 Gm8318-201ENSMUST00000182954 872 ntBASIC14.1□□□□□ -0.15
Chmp1b1Q99LU0 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.1□□□□□ -0.15
Chmp1b1Q99LU0 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.1□□□□□ -0.15
Chmp1b1Q99LU0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp1b1Q99LU0 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp1b1Q99LU0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp1b1Q99LU0 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp1b1Q99LU0 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp1b1Q99LU0 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp1b1Q99LU0 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp1b1Q99LU0 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp1b1Q99LU0 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp1b1Q99LU0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp1b1Q99LU0 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Chmp1b1Q99LU0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp1b1Q99LU0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms