Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Vmp1Q99KU0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vmp1Q99KU0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vmp1Q99KU0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Gm12134-201ENSMUST00000122109 520 ntBASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Gm6443-201ENSMUST00000203599 874 ntBASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vmp1Q99KU0 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Vmp1Q99KU0 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.4□□□□□ -0.11
Vmp1Q99KU0 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Vmp1Q99KU0 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.39□□□□□ -0.11
Vmp1Q99KU0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vmp1Q99KU0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vmp1Q99KU0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vmp1Q99KU0 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vmp1Q99KU0 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vmp1Q99KU0 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.39□□□□□ -0.11
Vmp1Q99KU0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vmp1Q99KU0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vmp1Q99KU0 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vmp1Q99KU0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vmp1Q99KU0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vmp1Q99KU0 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vmp1Q99KU0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Vmp1Q99KU0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
Vmp1Q99KU0 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vmp1Q99KU0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vmp1Q99KU0 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vmp1Q99KU0 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vmp1Q99KU0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vmp1Q99KU0 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vmp1Q99KU0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.38□□□□□ -0.11
Vmp1Q99KU0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vmp1Q99KU0 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Vmp1Q99KU0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vmp1Q99KU0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vmp1Q99KU0 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Vmp1Q99KU0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vmp1Q99KU0 Gm11764-201ENSMUST00000120221 623 ntBASIC14.38□□□□□ -0.11
Vmp1Q99KU0 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.38□□□□□ -0.11
Vmp1Q99KU0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vmp1Q99KU0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Vmp1Q99KU0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.38□□□□□ -0.11
Vmp1Q99KU0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vmp1Q99KU0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vmp1Q99KU0 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Vmp1Q99KU0 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vmp1Q99KU0 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vmp1Q99KU0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vmp1Q99KU0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vmp1Q99KU0 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vmp1Q99KU0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vmp1Q99KU0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vmp1Q99KU0 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Gm13036-201ENSMUST00000117799 748 ntBASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.37□□□□□ -0.11
Vmp1Q99KU0 Gm43514-201ENSMUST00000198852 424 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms