Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp1aQ921W0 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Gm9172-201ENSMUST00000212092 954 ntBASIC13.18□□□□□ -0.3
Chmp1aQ921W0 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.18□□□□□ -0.3
Chmp1aQ921W0 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.18□□□□□ -0.3
Chmp1aQ921W0 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp1aQ921W0 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Gm10013-201ENSMUST00000106074 672 ntBASIC13.17□□□□□ -0.3
Chmp1aQ921W0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Gm13312-201ENSMUST00000119631 718 ntBASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1aQ921W0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms