Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhac1Q91Y10 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhac1Q91Y10 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhac1Q91Y10 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhac1Q91Y10 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdhac1Q91Y10 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhac1Q91Y10 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhac1Q91Y10 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhac1Q91Y10 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhac1Q91Y10 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhac1Q91Y10 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhac1Q91Y10 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhac1Q91Y10 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhac1Q91Y10 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Pcdhac1Q91Y10 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhac1Q91Y10 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.97□□□□□ -0.17
Pcdhac1Q91Y10 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.96□□□□□ -0.17
Pcdhac1Q91Y10 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhac1Q91Y10 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.96□□□□□ -0.17
Pcdhac1Q91Y10 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhac1Q91Y10 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhac1Q91Y10 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhac1Q91Y10 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhac1Q91Y10 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhac1Q91Y10 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Pcdhac1Q91Y10 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.96□□□□□ -0.17
Pcdhac1Q91Y10 Gm5864-201ENSMUST00000202263 970 ntBASIC13.96□□□□□ -0.17
Pcdhac1Q91Y10 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhac1Q91Y10 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.96□□□□□ -0.17
Pcdhac1Q91Y10 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhac1Q91Y10 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhac1Q91Y10 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.96□□□□□ -0.17
Pcdhac1Q91Y10 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhac1Q91Y10 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhac1Q91Y10 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Pcdhac1Q91Y10 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhac1Q91Y10 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhac1Q91Y10 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.96□□□□□ -0.18
Pcdhac1Q91Y10 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhac1Q91Y10 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.18
Pcdhac1Q91Y10 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhac1Q91Y10 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
Pcdhac1Q91Y10 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.96□□□□□ -0.18
Pcdhac1Q91Y10 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 Gm11780-201ENSMUST00000136880 516 ntBASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhac1Q91Y10 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhac1Q91Y10 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhac1Q91Y10 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhac1Q91Y10 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhac1Q91Y10 Gm25990-201ENSMUST00000102440 86 ntBASIC13.94□□□□□ -0.18
Pcdhac1Q91Y10 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhac1Q91Y10 Gm13884-201ENSMUST00000118103 829 ntBASIC13.94□□□□□ -0.18
Pcdhac1Q91Y10 Gm13418-201ENSMUST00000119097 944 ntBASIC13.94□□□□□ -0.18
Pcdhac1Q91Y10 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhac1Q91Y10 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.94□□□□□ -0.18
Pcdhac1Q91Y10 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhac1Q91Y10 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdhac1Q91Y10 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhac1Q91Y10 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhac1Q91Y10 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhac1Q91Y10 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhac1Q91Y10 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhac1Q91Y10 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhac1Q91Y10 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhac1Q91Y10 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhac1Q91Y10 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhac1Q91Y10 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhac1Q91Y10 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhac1Q91Y10 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Pcdhac1Q91Y10 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhac1Q91Y10 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms