Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Gm37576-201ENSMUST00000194228 372 ntBASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdhb20Q91XZ9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Gm11652-201ENSMUST00000117842 1267 ntBASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Gm24513-201ENSMUST00000174964 138 ntBASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Gm5177-201ENSMUST00000183092 997 ntBASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Gm27301-201ENSMUST00000184012 127 ntBASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Gm27397-201ENSMUST00000184997 107 ntBASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 AC153932.1-201ENSMUST00000218558 787 ntBASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Manf-201ENSMUST00000069036 960 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb20Q91XZ9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Gm12601-201ENSMUST00000118994 846 ntBASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Gm11233-201ENSMUST00000122357 634 ntBASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Gm6736-201ENSMUST00000166583 948 ntBASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Gm8902-201ENSMUST00000174341 1096 ntBASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Gm3159-203ENSMUST00000177764 618 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Gm44492-201ENSMUST00000197012 141 ntBASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms