Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhb3Q91XZ7 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhb3Q91XZ7 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhb3Q91XZ7 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.96□□□□□ -0.02
Pcdhb3Q91XZ7 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb3Q91XZ7 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Gm34391-201ENSMUST00000203706 907 ntBASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Birc2-201ENSMUST00000054878 378 ntBASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb3Q91XZ7 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Gm15372-201ENSMUST00000120729 834 ntBASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Gm12895-201ENSMUST00000122214 226 ntBASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdhb3Q91XZ7 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms