Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ndc1Q8VCB1 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ndc1Q8VCB1 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ndc1Q8VCB1 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Ndc1Q8VCB1 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.08□□□□□ -0.16
Ndc1Q8VCB1 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc1Q8VCB1 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc1Q8VCB1 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Ndc1Q8VCB1 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc1Q8VCB1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc1Q8VCB1 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc1Q8VCB1 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc1Q8VCB1 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Ndc1Q8VCB1 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ndc1Q8VCB1 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.08□□□□□ -0.16
Ndc1Q8VCB1 Gm20553-201ENSMUST00000204205 844 ntBASIC14.08□□□□□ -0.16
Ndc1Q8VCB1 Gm8396-201ENSMUST00000057361 823 ntBASIC14.08□□□□□ -0.16
Ndc1Q8VCB1 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc1Q8VCB1 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.08□□□□□ -0.16
Ndc1Q8VCB1 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc1Q8VCB1 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc1Q8VCB1 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc1Q8VCB1 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc1Q8VCB1 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc1Q8VCB1 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc1Q8VCB1 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc1Q8VCB1 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc1Q8VCB1 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc1Q8VCB1 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc1Q8VCB1 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Rpph1-201ENSMUST00000175096 319 ntBASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Gm44335-201ENSMUST00000196879 141 ntBASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Gm44297-201ENSMUST00000198304 141 ntBASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Gm44346-201ENSMUST00000198851 141 ntBASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Gm10154-201ENSMUST00000084445 354 ntBASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc1Q8VCB1 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Ndc1Q8VCB1 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ndc1Q8VCB1 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ndc1Q8VCB1 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ndc1Q8VCB1 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ndc1Q8VCB1 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ndc1Q8VCB1 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Ndc1Q8VCB1 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ndc1Q8VCB1 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.06□□□□□ -0.16
Ndc1Q8VCB1 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ndc1Q8VCB1 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Ndc1Q8VCB1 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.06□□□□□ -0.16
Ndc1Q8VCB1 Gm2272-201ENSMUST00000194903 582 ntBASIC14.06□□□□□ -0.16
Ndc1Q8VCB1 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.06□□□□□ -0.16
Ndc1Q8VCB1 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.06□□□□□ -0.16
Ndc1Q8VCB1 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.06□□□□□ -0.16
Ndc1Q8VCB1 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.06□□□□□ -0.16
Ndc1Q8VCB1 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Ndc1Q8VCB1 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.06□□□□□ -0.16
Ndc1Q8VCB1 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ndc1Q8VCB1 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ndc1Q8VCB1 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ndc1Q8VCB1 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ndc1Q8VCB1 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ndc1Q8VCB1 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ndc1Q8VCB1 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms