Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf8Q8VC56 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf8Q8VC56 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Rnf8Q8VC56 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rnf8Q8VC56 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf8Q8VC56 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rnf8Q8VC56 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
Rnf8Q8VC56 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.41□□□□□ -0.1
Rnf8Q8VC56 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf8Q8VC56 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.41□□□□□ -0.1
Rnf8Q8VC56 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf8Q8VC56 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rnf8Q8VC56 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Gm11452-201ENSMUST00000122376 690 ntBASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Gm7230-201ENSMUST00000173026 815 ntBASIC14.4□□□□□ -0.1
Rnf8Q8VC56 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Gm18733-201ENSMUST00000173950 856 ntBASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf8Q8VC56 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf8Q8VC56 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rnf8Q8VC56 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf8Q8VC56 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf8Q8VC56 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf8Q8VC56 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf8Q8VC56 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf8Q8VC56 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf8Q8VC56 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf8Q8VC56 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Rnf8Q8VC56 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.39□□□□□ -0.11
Rnf8Q8VC56 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf8Q8VC56 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Rnf8Q8VC56 Gm10060-201ENSMUST00000212002 111 ntBASIC14.39□□□□□ -0.11
Rnf8Q8VC56 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf8Q8VC56 Gm7461-201ENSMUST00000058918 827 ntBASIC14.39□□□□□ -0.11
Rnf8Q8VC56 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf8Q8VC56 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf8Q8VC56 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf8Q8VC56 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.39□□□□□ -0.11
Rnf8Q8VC56 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Rnf8Q8VC56 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf8Q8VC56 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf8Q8VC56 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.39□□□□□ -0.11
Rnf8Q8VC56 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.39□□□□□ -0.11
Rnf8Q8VC56 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Rnf8Q8VC56 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf8Q8VC56 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.38□□□□□ -0.11
Rnf8Q8VC56 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf8Q8VC56 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf8Q8VC56 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf8Q8VC56 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf8Q8VC56 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rnf8Q8VC56 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Rnf8Q8VC56 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf8Q8VC56 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf8Q8VC56 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf8Q8VC56 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf8Q8VC56 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf8Q8VC56 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf8Q8VC56 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf8Q8VC56 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.38□□□□□ -0.11
Rnf8Q8VC56 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf8Q8VC56 Gm7222-201ENSMUST00000117512 906 ntBASIC14.38□□□□□ -0.11
Rnf8Q8VC56 Gm13418-201ENSMUST00000119097 944 ntBASIC14.38□□□□□ -0.11
Rnf8Q8VC56 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf8Q8VC56 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.38□□□□□ -0.11
Rnf8Q8VC56 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf8Q8VC56 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Rnf8Q8VC56 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf8Q8VC56 Gm19164-201ENSMUST00000210667 640 ntBASIC14.38□□□□□ -0.11
Rnf8Q8VC56 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf8Q8VC56 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf8Q8VC56 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf8Q8VC56 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf8Q8VC56 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf8Q8VC56 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms