Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps39Q8R5L3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Vps39Q8R5L3 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Vps39Q8R5L3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.95□□□□□ -0.02
Vps39Q8R5L3 Gm5682-201ENSMUST00000173402 505 ntBASIC14.95□□□□□ -0.02
Vps39Q8R5L3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vps39Q8R5L3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps39Q8R5L3 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps39Q8R5L3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps39Q8R5L3 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps39Q8R5L3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Vps39Q8R5L3 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps39Q8R5L3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps39Q8R5L3 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps39Q8R5L3 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vps39Q8R5L3 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps39Q8R5L3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps39Q8R5L3 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps39Q8R5L3 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps39Q8R5L3 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps39Q8R5L3 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps39Q8R5L3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Vps39Q8R5L3 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps39Q8R5L3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps39Q8R5L3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps39Q8R5L3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.94□□□□□ -0.02
Vps39Q8R5L3 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.94□□□□□ -0.02
Vps39Q8R5L3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.94□□□□□ -0.02
Vps39Q8R5L3 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps39Q8R5L3 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps39Q8R5L3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps39Q8R5L3 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Vps39Q8R5L3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Vps39Q8R5L3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vps39Q8R5L3 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps39Q8R5L3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps39Q8R5L3 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps39Q8R5L3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps39Q8R5L3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps39Q8R5L3 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps39Q8R5L3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps39Q8R5L3 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Vps39Q8R5L3 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vps39Q8R5L3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps39Q8R5L3 Gm15173-201ENSMUST00000122049 433 ntBASIC14.93□□□□□ -0.02
Vps39Q8R5L3 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps39Q8R5L3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Vps39Q8R5L3 Gm6550-201ENSMUST00000187574 993 ntBASIC14.93□□□□□ -0.02
Vps39Q8R5L3 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.93□□□□□ -0.02
Vps39Q8R5L3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.93□□□□□ -0.02
Vps39Q8R5L3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps39Q8R5L3 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vps39Q8R5L3 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Vps39Q8R5L3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps39Q8R5L3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vps39Q8R5L3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.93□□□□□ -0.02
Vps39Q8R5L3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Vps39Q8R5L3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps39Q8R5L3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps39Q8R5L3 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.93□□□□□ -0.02
Vps39Q8R5L3 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Vps39Q8R5L3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Vps39Q8R5L3 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Vps39Q8R5L3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Vps39Q8R5L3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Vps39Q8R5L3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Vps39Q8R5L3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps39Q8R5L3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps39Q8R5L3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.92□□□□□ -0.02
Vps39Q8R5L3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vps39Q8R5L3 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vps39Q8R5L3 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps39Q8R5L3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Vps39Q8R5L3 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.92□□□□□ -0.02
Vps39Q8R5L3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps39Q8R5L3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps39Q8R5L3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vps39Q8R5L3 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vps39Q8R5L3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps39Q8R5L3 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps39Q8R5L3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps39Q8R5L3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps39Q8R5L3 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps39Q8R5L3 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps39Q8R5L3 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps39Q8R5L3 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps39Q8R5L3 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Vps39Q8R5L3 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Vps39Q8R5L3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps39Q8R5L3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vps39Q8R5L3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps39Q8R5L3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps39Q8R5L3 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Vps39Q8R5L3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps39Q8R5L3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps39Q8R5L3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps39Q8R5L3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps39Q8R5L3 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps39Q8R5L3 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps39Q8R5L3 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms