Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Nudcd3Q8R1N4 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd3Q8R1N4 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Nudcd3Q8R1N4 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd3Q8R1N4 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd3Q8R1N4 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd3Q8R1N4 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd3Q8R1N4 Olfr129-201ENSMUST00000122318 993 ntBASIC14.93□□□□□ -0.02
Nudcd3Q8R1N4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd3Q8R1N4 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd3Q8R1N4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Nudcd3Q8R1N4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd3Q8R1N4 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd3Q8R1N4 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd3Q8R1N4 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd3Q8R1N4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Nudcd3Q8R1N4 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd3Q8R1N4 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd3Q8R1N4 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd3Q8R1N4 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd3Q8R1N4 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd3Q8R1N4 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd3Q8R1N4 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Nudcd3Q8R1N4 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd3Q8R1N4 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd3Q8R1N4 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Nudcd3Q8R1N4 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd3Q8R1N4 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nudcd3Q8R1N4 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 Gm15165-201ENSMUST00000118140 502 ntBASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 Gm4459-201ENSMUST00000118750 468 ntBASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nudcd3Q8R1N4 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nudcd3Q8R1N4 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nudcd3Q8R1N4 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nudcd3Q8R1N4 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nudcd3Q8R1N4 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nudcd3Q8R1N4 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.91□□□□□ -0.02
Nudcd3Q8R1N4 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nudcd3Q8R1N4 Gm12497-201ENSMUST00000138778 237 ntBASIC14.91□□□□□ -0.02
Nudcd3Q8R1N4 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nudcd3Q8R1N4 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.91□□□□□ -0.02
Nudcd3Q8R1N4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nudcd3Q8R1N4 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nudcd3Q8R1N4 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nudcd3Q8R1N4 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Nudcd3Q8R1N4 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nudcd3Q8R1N4 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nudcd3Q8R1N4 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nudcd3Q8R1N4 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nudcd3Q8R1N4 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nudcd3Q8R1N4 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nudcd3Q8R1N4 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nudcd3Q8R1N4 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nudcd3Q8R1N4 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nudcd3Q8R1N4 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.91□□□□□ -0.02
Nudcd3Q8R1N4 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.91□□□□□ -0.02
Nudcd3Q8R1N4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Nudcd3Q8R1N4 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms