Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 AC139580.1-202ENSMUST00000223574 928 ntBASIC19.38■□□□□ 0.69
Ddx54Q8K4L0 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx54Q8K4L0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
Ddx54Q8K4L0 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ddx54Q8K4L0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx54Q8K4L0 Mir125a-201ENSMUST00000083545 68 ntBASIC19.38■□□□□ 0.69
Ddx54Q8K4L0 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx54Q8K4L0 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC19.38■□□□□ 0.69
Ddx54Q8K4L0 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx54Q8K4L0 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx54Q8K4L0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ddx54Q8K4L0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx54Q8K4L0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.38■□□□□ 0.69
Ddx54Q8K4L0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
Ddx54Q8K4L0 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx54Q8K4L0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.37■□□□□ 0.69
Ddx54Q8K4L0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Ddx54Q8K4L0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx54Q8K4L0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx54Q8K4L0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx54Q8K4L0 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx54Q8K4L0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ddx54Q8K4L0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Ddx54Q8K4L0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx54Q8K4L0 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ddx54Q8K4L0 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ddx54Q8K4L0 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx54Q8K4L0 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx54Q8K4L0 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ddx54Q8K4L0 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx54Q8K4L0 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC19.37■□□□□ 0.69
Ddx54Q8K4L0 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx54Q8K4L0 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx54Q8K4L0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx54Q8K4L0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19.37■□□□□ 0.69
Ddx54Q8K4L0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx54Q8K4L0 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx54Q8K4L0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx54Q8K4L0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx54Q8K4L0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx54Q8K4L0 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC19.36■□□□□ 0.69
Ddx54Q8K4L0 Gm9816-201ENSMUST00000122292 1414 ntBASIC19.36■□□□□ 0.69
Ddx54Q8K4L0 Gm42853-201ENSMUST00000201273 1387 ntBASIC19.36■□□□□ 0.69
Ddx54Q8K4L0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx54Q8K4L0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx54Q8K4L0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx54Q8K4L0 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx54Q8K4L0 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx54Q8K4L0 Mir3102-201ENSMUST00000175555 104 ntBASIC19.36■□□□□ 0.69
Ddx54Q8K4L0 Gm37424-201ENSMUST00000191727 561 ntBASIC19.36■□□□□ 0.69
Ddx54Q8K4L0 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx54Q8K4L0 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx54Q8K4L0 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Ddx54Q8K4L0 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx54Q8K4L0 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx54Q8K4L0 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC19.36■□□□□ 0.69
Ddx54Q8K4L0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx54Q8K4L0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ddx54Q8K4L0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx54Q8K4L0 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx54Q8K4L0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx54Q8K4L0 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.35■□□□□ 0.69
Ddx54Q8K4L0 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx54Q8K4L0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.35■□□□□ 0.69
Ddx54Q8K4L0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx54Q8K4L0 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx54Q8K4L0 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx54Q8K4L0 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC19.35■□□□□ 0.69
Ddx54Q8K4L0 Gm7446-201ENSMUST00000221035 1240 ntBASIC19.35■□□□□ 0.69
Ddx54Q8K4L0 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC19.35■□□□□ 0.69
Ddx54Q8K4L0 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx54Q8K4L0 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx54Q8K4L0 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx54Q8K4L0 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx54Q8K4L0 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ddx54Q8K4L0 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx54Q8K4L0 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx54Q8K4L0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx54Q8K4L0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx54Q8K4L0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.35■□□□□ 0.69
Ddx54Q8K4L0 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx54Q8K4L0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx54Q8K4L0 AC166574.6-201ENSMUST00000227889 1806 ntBASIC19.35■□□□□ 0.69
Ddx54Q8K4L0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.34■□□□□ 0.69
Ddx54Q8K4L0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx54Q8K4L0 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx54Q8K4L0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx54Q8K4L0 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx54Q8K4L0 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx54Q8K4L0 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ddx54Q8K4L0 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx54Q8K4L0 Gm12585-201ENSMUST00000117307 290 ntBASIC19.34■□□□□ 0.69
Ddx54Q8K4L0 Mir7654-201ENSMUST00000185082 70 ntBASIC19.34■□□□□ 0.69
Ddx54Q8K4L0 Gm6916-202ENSMUST00000205523 195 ntBASIC19.34■□□□□ 0.69
Ddx54Q8K4L0 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx54Q8K4L0 Gm8399-201ENSMUST00000082300 1117 ntBASIC19.34■□□□□ 0.69
Ddx54Q8K4L0 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx54Q8K4L0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC19.34■□□□□ 0.69
Ddx54Q8K4L0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx54Q8K4L0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms