Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.08□□□□□ -0.15
Clrn1Q8K445 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Clrn1Q8K445 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Clrn1Q8K445 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Clrn1Q8K445 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn1Q8K445 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Clrn1Q8K445 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn1Q8K445 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn1Q8K445 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn1Q8K445 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn1Q8K445 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn1Q8K445 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
Clrn1Q8K445 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
Clrn1Q8K445 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn1Q8K445 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.08□□□□□ -0.16
Clrn1Q8K445 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Clrn1Q8K445 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Clrn1Q8K445 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn1Q8K445 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn1Q8K445 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.08□□□□□ -0.16
Clrn1Q8K445 Gm5364-201ENSMUST00000216789 889 ntBASIC14.08□□□□□ -0.16
Clrn1Q8K445 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn1Q8K445 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn1Q8K445 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn1Q8K445 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn1Q8K445 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn1Q8K445 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn1Q8K445 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.08□□□□□ -0.16
Clrn1Q8K445 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn1Q8K445 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn1Q8K445 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn1Q8K445 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn1Q8K445 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn1Q8K445 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn1Q8K445 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn1Q8K445 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn1Q8K445 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn1Q8K445 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn1Q8K445 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn1Q8K445 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn1Q8K445 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn1Q8K445 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.07□□□□□ -0.16
Clrn1Q8K445 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn1Q8K445 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn1Q8K445 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn1Q8K445 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn1Q8K445 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.07□□□□□ -0.16
Clrn1Q8K445 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn1Q8K445 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn1Q8K445 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Clrn1Q8K445 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn1Q8K445 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.07□□□□□ -0.16
Clrn1Q8K445 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.07□□□□□ -0.16
Clrn1Q8K445 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.07□□□□□ -0.16
Clrn1Q8K445 Gm18206-201ENSMUST00000207027 926 ntBASIC14.07□□□□□ -0.16
Clrn1Q8K445 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.07□□□□□ -0.16
Clrn1Q8K445 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn1Q8K445 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn1Q8K445 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.07□□□□□ -0.16
Clrn1Q8K445 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn1Q8K445 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn1Q8K445 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn1Q8K445 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn1Q8K445 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.07□□□□□ -0.16
Clrn1Q8K445 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Clrn1Q8K445 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn1Q8K445 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Clrn1Q8K445 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn1Q8K445 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
Clrn1Q8K445 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn1Q8K445 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn1Q8K445 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn1Q8K445 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn1Q8K445 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn1Q8K445 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Clrn1Q8K445 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.06□□□□□ -0.16
Clrn1Q8K445 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn1Q8K445 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn1Q8K445 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Clrn1Q8K445 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn1Q8K445 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn1Q8K445 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn1Q8K445 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn1Q8K445 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn1Q8K445 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.06□□□□□ -0.16
Clrn1Q8K445 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn1Q8K445 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.06□□□□□ -0.16
Clrn1Q8K445 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn1Q8K445 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn1Q8K445 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn1Q8K445 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn1Q8K445 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn1Q8K445 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.06□□□□□ -0.16
Clrn1Q8K445 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Clrn1Q8K445 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Clrn1Q8K445 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.06□□□□□ -0.16
Clrn1Q8K445 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn1Q8K445 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn1Q8K445 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms