Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn1Q8K0T0 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn1Q8K0T0 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn1Q8K0T0 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn1Q8K0T0 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn1Q8K0T0 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn1Q8K0T0 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn1Q8K0T0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.2■□□□□ 0.34
Rtn1Q8K0T0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn1Q8K0T0 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.2■□□□□ 0.34
Rtn1Q8K0T0 Gm9385-201ENSMUST00000117563 472 ntBASIC17.2■□□□□ 0.34
Rtn1Q8K0T0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.2■□□□□ 0.34
Rtn1Q8K0T0 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.2■□□□□ 0.34
Rtn1Q8K0T0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn1Q8K0T0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn1Q8K0T0 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.2■□□□□ 0.34
Rtn1Q8K0T0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Rtn1Q8K0T0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn1Q8K0T0 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.2■□□□□ 0.34
Rtn1Q8K0T0 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn1Q8K0T0 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn1Q8K0T0 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn1Q8K0T0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn1Q8K0T0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn1Q8K0T0 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn1Q8K0T0 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn1Q8K0T0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn1Q8K0T0 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn1Q8K0T0 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn1Q8K0T0 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Rtn1Q8K0T0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn1Q8K0T0 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn1Q8K0T0 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.19■□□□□ 0.34
Rtn1Q8K0T0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn1Q8K0T0 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn1Q8K0T0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn1Q8K0T0 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn1Q8K0T0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn1Q8K0T0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn1Q8K0T0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn1Q8K0T0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn1Q8K0T0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Rtn1Q8K0T0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Rtn1Q8K0T0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.19■□□□□ 0.34
Rtn1Q8K0T0 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rtn1Q8K0T0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn1Q8K0T0 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn1Q8K0T0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn1Q8K0T0 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn1Q8K0T0 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn1Q8K0T0 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn1Q8K0T0 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn1Q8K0T0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn1Q8K0T0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn1Q8K0T0 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn1Q8K0T0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn1Q8K0T0 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn1Q8K0T0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.18■□□□□ 0.34
Rtn1Q8K0T0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.18■□□□□ 0.34
Rtn1Q8K0T0 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.18■□□□□ 0.34
Rtn1Q8K0T0 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn1Q8K0T0 Gm10175-201ENSMUST00000086013 645 ntBASIC17.18■□□□□ 0.34
Rtn1Q8K0T0 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn1Q8K0T0 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn1Q8K0T0 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rtn1Q8K0T0 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn1Q8K0T0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn1Q8K0T0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn1Q8K0T0 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.18■□□□□ 0.34
Rtn1Q8K0T0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Rtn1Q8K0T0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn1Q8K0T0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn1Q8K0T0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn1Q8K0T0 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn1Q8K0T0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn1Q8K0T0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn1Q8K0T0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn1Q8K0T0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn1Q8K0T0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn1Q8K0T0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.17■□□□□ 0.34
Rtn1Q8K0T0 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.17■□□□□ 0.34
Rtn1Q8K0T0 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Rtn1Q8K0T0 Gm16026-204ENSMUST00000162652 683 ntBASIC17.17■□□□□ 0.34
Rtn1Q8K0T0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn1Q8K0T0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn1Q8K0T0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.17■□□□□ 0.34
Rtn1Q8K0T0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn1Q8K0T0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn1Q8K0T0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn1Q8K0T0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.17■□□□□ 0.34
Rtn1Q8K0T0 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn1Q8K0T0 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn1Q8K0T0 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn1Q8K0T0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn1Q8K0T0 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Rtn1Q8K0T0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn1Q8K0T0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn1Q8K0T0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn1Q8K0T0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn1Q8K0T0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms