Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Gm43195-201ENSMUST00000200614 2332 ntBASIC19.25■□□□□ 0.67
Rab11fip3Q8CHD8 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab11fip3Q8CHD8 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC19.25■□□□□ 0.67
Rab11fip3Q8CHD8 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab11fip3Q8CHD8 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab11fip3Q8CHD8 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab11fip3Q8CHD8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rab11fip3Q8CHD8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab11fip3Q8CHD8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Rab11fip3Q8CHD8 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab11fip3Q8CHD8 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab11fip3Q8CHD8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab11fip3Q8CHD8 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rab11fip3Q8CHD8 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC19.24■□□□□ 0.67
Rab11fip3Q8CHD8 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC19.24■□□□□ 0.67
Rab11fip3Q8CHD8 Gm20949-201ENSMUST00000206478 952 ntBASIC19.24■□□□□ 0.67
Rab11fip3Q8CHD8 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab11fip3Q8CHD8 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rab11fip3Q8CHD8 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab11fip3Q8CHD8 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab11fip3Q8CHD8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab11fip3Q8CHD8 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rab11fip3Q8CHD8 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab11fip3Q8CHD8 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rab11fip3Q8CHD8 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rab11fip3Q8CHD8 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rab11fip3Q8CHD8 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab11fip3Q8CHD8 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Rab11fip3Q8CHD8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rab11fip3Q8CHD8 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Rab11fip3Q8CHD8 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rab11fip3Q8CHD8 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC19.23■□□□□ 0.67
Rab11fip3Q8CHD8 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC19.23■□□□□ 0.67
Rab11fip3Q8CHD8 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab11fip3Q8CHD8 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab11fip3Q8CHD8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rab11fip3Q8CHD8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab11fip3Q8CHD8 Gm21009-201ENSMUST00000197169 1669 ntBASIC19.23■□□□□ 0.67
Rab11fip3Q8CHD8 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab11fip3Q8CHD8 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab11fip3Q8CHD8 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab11fip3Q8CHD8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab11fip3Q8CHD8 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab11fip3Q8CHD8 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rab11fip3Q8CHD8 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab11fip3Q8CHD8 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC19.22■□□□□ 0.67
Rab11fip3Q8CHD8 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rab11fip3Q8CHD8 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab11fip3Q8CHD8 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC19.22■□□□□ 0.67
Rab11fip3Q8CHD8 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC19.22■□□□□ 0.67
Rab11fip3Q8CHD8 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab11fip3Q8CHD8 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC19.22■□□□□ 0.67
Rab11fip3Q8CHD8 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Rab11fip3Q8CHD8 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab11fip3Q8CHD8 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab11fip3Q8CHD8 Gm27618-201ENSMUST00000183671 60 ntBASIC19.22■□□□□ 0.67
Rab11fip3Q8CHD8 Gm18766-201ENSMUST00000189811 808 ntBASIC19.22■□□□□ 0.67
Rab11fip3Q8CHD8 Gm9182-201ENSMUST00000217829 639 ntBASIC19.22■□□□□ 0.67
Rab11fip3Q8CHD8 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC19.22■□□□□ 0.67
Rab11fip3Q8CHD8 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab11fip3Q8CHD8 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rab11fip3Q8CHD8 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab11fip3Q8CHD8 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab11fip3Q8CHD8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab11fip3Q8CHD8 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
Rab11fip3Q8CHD8 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rab11fip3Q8CHD8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab11fip3Q8CHD8 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab11fip3Q8CHD8 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rab11fip3Q8CHD8 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Rab11fip3Q8CHD8 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab11fip3Q8CHD8 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC19.22■□□□□ 0.67
Rab11fip3Q8CHD8 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab11fip3Q8CHD8 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab11fip3Q8CHD8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab11fip3Q8CHD8 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rab11fip3Q8CHD8 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC19.21■□□□□ 0.67
Rab11fip3Q8CHD8 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab11fip3Q8CHD8 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab11fip3Q8CHD8 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab11fip3Q8CHD8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab11fip3Q8CHD8 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rab11fip3Q8CHD8 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rab11fip3Q8CHD8 Gm8410-201ENSMUST00000117225 605 ntBASIC19.21■□□□□ 0.67
Rab11fip3Q8CHD8 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC19.21■□□□□ 0.67
Rab11fip3Q8CHD8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rab11fip3Q8CHD8 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC19.21■□□□□ 0.67
Rab11fip3Q8CHD8 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rab11fip3Q8CHD8 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rab11fip3Q8CHD8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab11fip3Q8CHD8 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC19.21■□□□□ 0.67
Rab11fip3Q8CHD8 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC19.21■□□□□ 0.67
Rab11fip3Q8CHD8 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab11fip3Q8CHD8 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rab11fip3Q8CHD8 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC19.21■□□□□ 0.67
Rab11fip3Q8CHD8 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
Rab11fip3Q8CHD8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab11fip3Q8CHD8 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab11fip3Q8CHD8 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab11fip3Q8CHD8 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms