Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox30Q8CGW4 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox30Q8CGW4 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox30Q8CGW4 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.3■□□□□ 0.2
Sox30Q8CGW4 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sox30Q8CGW4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sox30Q8CGW4 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sox30Q8CGW4 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox30Q8CGW4 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Sox30Q8CGW4 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox30Q8CGW4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.3■□□□□ 0.2
Sox30Q8CGW4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox30Q8CGW4 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox30Q8CGW4 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox30Q8CGW4 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox30Q8CGW4 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox30Q8CGW4 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox30Q8CGW4 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox30Q8CGW4 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sox30Q8CGW4 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox30Q8CGW4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sox30Q8CGW4 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox30Q8CGW4 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Sox30Q8CGW4 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox30Q8CGW4 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Sox30Q8CGW4 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox30Q8CGW4 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sox30Q8CGW4 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox30Q8CGW4 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox30Q8CGW4 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Sox30Q8CGW4 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.29■□□□□ 0.2
Sox30Q8CGW4 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox30Q8CGW4 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.29■□□□□ 0.2
Sox30Q8CGW4 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sox30Q8CGW4 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox30Q8CGW4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Sox30Q8CGW4 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sox30Q8CGW4 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Sox30Q8CGW4 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox30Q8CGW4 Gm13464-201ENSMUST00000119418 935 ntBASIC16.29■□□□□ 0.2
Sox30Q8CGW4 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sox30Q8CGW4 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.29■□□□□ 0.2
Sox30Q8CGW4 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.29■□□□□ 0.2
Sox30Q8CGW4 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.29■□□□□ 0.2
Sox30Q8CGW4 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox30Q8CGW4 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.29■□□□□ 0.2
Sox30Q8CGW4 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox30Q8CGW4 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sox30Q8CGW4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox30Q8CGW4 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.29■□□□□ 0.2
Sox30Q8CGW4 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox30Q8CGW4 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox30Q8CGW4 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Sox30Q8CGW4 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Sox30Q8CGW4 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Sox30Q8CGW4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox30Q8CGW4 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox30Q8CGW4 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox30Q8CGW4 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox30Q8CGW4 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox30Q8CGW4 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Sox30Q8CGW4 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox30Q8CGW4 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Sox30Q8CGW4 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sox30Q8CGW4 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Sox30Q8CGW4 Gm17807-201ENSMUST00000186869 298 ntBASIC16.28■□□□□ 0.2
Sox30Q8CGW4 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sox30Q8CGW4 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox30Q8CGW4 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox30Q8CGW4 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sox30Q8CGW4 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox30Q8CGW4 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.28■□□□□ 0.2
Sox30Q8CGW4 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox30Q8CGW4 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Sox30Q8CGW4 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox30Q8CGW4 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox30Q8CGW4 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox30Q8CGW4 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox30Q8CGW4 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox30Q8CGW4 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox30Q8CGW4 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox30Q8CGW4 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox30Q8CGW4 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.27■□□□□ 0.2
Sox30Q8CGW4 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.27■□□□□ 0.2
Sox30Q8CGW4 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.27■□□□□ 0.2
Sox30Q8CGW4 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Sox30Q8CGW4 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.27■□□□□ 0.2
Sox30Q8CGW4 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sox30Q8CGW4 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
Sox30Q8CGW4 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox30Q8CGW4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox30Q8CGW4 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Sox30Q8CGW4 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Sox30Q8CGW4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox30Q8CGW4 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox30Q8CGW4 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox30Q8CGW4 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox30Q8CGW4 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
Sox30Q8CGW4 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox30Q8CGW4 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms