Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rdh1Q8CGV4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rdh1Q8CGV4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Sybu-209ENSMUST00000228639 4113 ntBASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 AA543401-201ENSMUST00000164248 1269 ntBASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Gm5779-201ENSMUST00000218467 910 ntBASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh1Q8CGV4 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh1Q8CGV4 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Rdh1Q8CGV4 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh1Q8CGV4 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh1Q8CGV4 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh1Q8CGV4 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh1Q8CGV4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh1Q8CGV4 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh1Q8CGV4 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh1Q8CGV4 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh1Q8CGV4 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh1Q8CGV4 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh1Q8CGV4 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh1Q8CGV4 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh1Q8CGV4 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh1Q8CGV4 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.46□□□□□ -0.09
Rdh1Q8CGV4 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh1Q8CGV4 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh1Q8CGV4 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.46□□□□□ -0.09
Rdh1Q8CGV4 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.46□□□□□ -0.09
Rdh1Q8CGV4 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.46□□□□□ -0.09
Rdh1Q8CGV4 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.46□□□□□ -0.09
Rdh1Q8CGV4 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh1Q8CGV4 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh1Q8CGV4 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Rdh1Q8CGV4 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh1Q8CGV4 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh1Q8CGV4 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh1Q8CGV4 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh1Q8CGV4 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rdh1Q8CGV4 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rdh1Q8CGV4 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rdh1Q8CGV4 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rdh1Q8CGV4 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Rdh1Q8CGV4 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Rdh1Q8CGV4 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rdh1Q8CGV4 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rdh1Q8CGV4 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.45□□□□□ -0.1
Rdh1Q8CGV4 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rdh1Q8CGV4 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rdh1Q8CGV4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rdh1Q8CGV4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rdh1Q8CGV4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rdh1Q8CGV4 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.45□□□□□ -0.1
Rdh1Q8CGV4 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Rdh1Q8CGV4 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rdh1Q8CGV4 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.45□□□□□ -0.1
Rdh1Q8CGV4 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Rdh1Q8CGV4 Gm9824-201ENSMUST00000178707 561 ntBASIC14.45□□□□□ -0.1
Rdh1Q8CGV4 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rdh1Q8CGV4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Rdh1Q8CGV4 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms